PAI Gene Information


Name : lscR
Accession : AAO18040.1
PAI name : TTSS locus
PAI accession : AY144116
Strain : Photorhabdus luminescens TTO1
Virulence or Resistance: Virulence
Product : LscR
Function : -
Note : similar to Pseudomonas aeruginosa PscR type III export translocation protein
Homologs in the searched genomes :   760 hits    ( 760 protein-level )  
Publication :
    -Waterfield,N.R. and ffrench-Constant,R.H., "Direct Submission", Submitted (22-AUG-2002) Biology and Biochemistry, University of Bath, Claverton Down, Bath BA2 7AY, UK.

    -Waterfield,N.R., Daborn,P.J. and ffrench-Constant,R.H., "Genomic islands in Photorhabdus", Trends Microbiol. 10 (12), 541-545 (2002) PUBMED 12564983.


DNA sequence :
ATGATCCAGTTACCAAACGAATTGGATCTCATCATCGGTCTGGCTTTGCTGGCTCTGCTTCCCTTTATTGCGGTGATGGC
GACCTCTTTTCTCAAACTGGCCGTGGTATTTTCCTTACTGCGTAACGCGTTGGGCGTACAGCAGATCCCACCTAACATGG
CAATGTATGGATTAGCCATTATCCTCACTATCTATGTGATGGCTCCGGTGGGTTTCGCCACTCAAGATTACCTGCGTCAA
AATGAAGTTTCATTCAGCAACGCACAATCAGTAGAGAAATTTGTGGAAGAGGGTCTGACGCCTTACCGAAACTTTCTTAA
ACAGCATATTAAGCCCAGTGAACGTACTTTTTTTATCGACAGTACCCGACAAATTTGGCCAAGCCAGTATGCAGATCGGC
TAGAACCAGACAGCTTGTTGATACTGTTACCCTCCTTTACAGTCAGTGAATTAACCCGAGCTTTTGAAATCGGGTTTCTG
CTTTATCTGCCGTTTATTGCAATCGATCTCATTATTTCTAACATTCTGCTCGCAATGGGAATGATGATGGTTTCTCCAAT
GACTATCTCTCTTCCTTTCAAGTTACTGTTATTTGTCCTGCTTGATGGCTGGACACGCCTGACACACGGCCTTGTTATCA
GTTACGGAGATTGA

Protein sequence :
MIQLPNELDLIIGLALLALLPFIAVMATSFLKLAVVFSLLRNALGVQQIPPNMAMYGLAIILTIYVMAPVGFATQDYLRQ
NEVSFSNAQSVEKFVEEGLTPYRNFLKQHIKPSERTFFIDSTRQIWPSQYADRLEPDSLLILLPSFTVSELTRAFEIGFL
LYLPFIAIDLIISNILLAMGMMMVSPMTISLPFKLLLFVLLDGWTRLTHGLVISYGD