Name : int
Accession : AAN62223.1
PAI name : PAGI-3(SG)
PAI accession : AF440524
Strain : Pseudomonas aeruginosa B136-33
Virulence or Resistance: Not determined
Product : putative integrase
Function : -
Note : bacteriophage P4 integrase subfamily; similar to Xylella fastidiosa XF1718 (int) and Pseudomonas aeruginosa C ORF C1
Homologs in the searched genomes : 64 hits ( 64 protein-level )
Publication :
-Larbig,K.D., Christmann,A., Johann,A., Hartsch,T., Merkl,R., Klockgether,J., Fritz,H.-J. and Tuemmler,B., "Direct Submission", Submitted (30-OCT-2001) Klinische Forschergruppe, Medizinische Hochschule Hannover, Carl-Neuberg-Strasse 1, Hannover 30623, Germany.
-Larbig,K.D., Christmann,A., Johann,A., Klockgether,J., Hartsch,T., Merkl,R., Wiehlmann,L., Fritz,H.J. and Tummler,B., "Gene islands integrated into tRNA(Gly) genes confer genome diversity on a Pseudomonas aeruginosa clone", J. Bacteriol. 184 (23), 6665-6680 (2002) PUBMED 12426355.
| DNA sequence : | |
ATGGCACTCACAGACGTCGCCGTCCGGCAGGCTCGCCCGACTGGCAAAGACTACACCCTCCCTGACTTTGATGGCCTTTC
ATTGGCGGTATCCGCCAAGGGTGGCAAGTCGTGGCACTTCAGGTACTACTGGGCCGCTAAACAGAAGCGGATGTCCCTGG
GCACCTATCCGGCGGTTAGCCTGCGGGAGGCGCGGGCGTTGCGCGATGAGGCCCGTGCCTTGGCCGCCAAAGGCATCAAT
CCCAAGGTCGACCGTAAGCACAAGCTCCGCGCTGTCCGCTTGGCGACGGAGAACAGCTTCAAGGCAGTGTATCTGCAGTG
GCTCGCACACCGCAGGCTGGAGCTCAAGGAGGGGCGGCAGAGCACGCTGTCACAGATCCAGCGTATCTTCGACAAGGATG
TGTTGCCTCCCCTTGGCACCGTAACCATCTTCGATATCCGCCGGTCCAATCTGCTAGACGTCCTCGCCACGATCGAGCAG
CGCGGGGCCTTCACAACCGCGGAGAAAGTGCGTACCTGGTTCCGGCAGTTGTTCCGCTTTGCCATGGTGAAAGCCGAAGG
GTTGGTGGGTAACCCTGCGTCCGATCTGGATGTAGTTGCAGCGCCCAAGCCCCCCGTTGCTCATAACCCGTTCCTGCGCT
TGCACGAGTTGCCCGAACTGCTGCGCAAGCTGCGCTGTTATAGAGGCAACATCACCACGCAGCTGGGTATTCGTCTGCTG
TTGCTGACCGGCGTGCGCACCGGCGAGCTGCGCTTGGCGACCCCGGATCAATTCGACCTTGAACGTGGCTTGTGGATCAT
TCCTCCTGAAGTGGTCAAGCAACTGCAGGACGGCATGCGCAAGCGCGGAAAGCGGCCGCAGGACATTCCGCCCTACATCG
TGCCGTTATCGGTCCAGGCCATAGAGATCGTTCGCTACCTGCTGGAGCAGGTCAAACCTGCGCAGCGCCACCTGCTGGCC
CACCGTGGCGACTTGAAGAAGCGCATTAGCGAGAACACGCTGAATGCAGCGCTCAGGCGCATGGGCTACGAGGGGCTGCT
CACCGGCCATGGCATTCGCGGCACGCTCTCCACGGGACTCAACGAGATCGGCTACCCCAAGATTTGGGTGGATGCCCAGC
TCTCGCACGCGGATCCCAACAAGGTCAGCGCGACCTACAACCACGCCCTGTATGTGGAGCCGCGTCGGAAGATGATGCAG
GACTGGGCAGATCGGCTCGATCTGCTGGAGCAGGGGGATGTCAAGGCTGCCAGCTTGCATCTGGCCATCCACATCAACGG
TACGCAGGTTCAGAATGAAAGTGAAGGCTTCCTGGCGATAGAAGGAAGTGCAGGGACAAGCGTTGGCAACTCAGCTCAGC
GGAATCTTGGTGGTGAAGCCACCTGGAAGACGGGCCAGCGCATGGCCTAG
|
| Protein sequence : | |
MALTDVAVRQARPTGKDYTLPDFDGLSLAVSAKGGKSWHFRYYWAAKQKRMSLGTYPAVSLREARALRDEARALAAKGIN
PKVDRKHKLRAVRLATENSFKAVYLQWLAHRRLELKEGRQSTLSQIQRIFDKDVLPPLGTVTIFDIRRSNLLDVLATIEQ
RGAFTTAEKVRTWFRQLFRFAMVKAEGLVGNPASDLDVVAAPKPPVAHNPFLRLHELPELLRKLRCYRGNITTQLGIRLL
LLTGVRTGELRLATPDQFDLERGLWIIPPEVVKQLQDGMRKRGKRPQDIPPYIVPLSVQAIEIVRYLLEQVKPAQRHLLA
HRGDLKKRISENTLNAALRRMGYEGLLTGHGIRGTLSTGLNEIGYPKIWVDAQLSHADPNKVSATYNHALYVEPRRKMMQ
DWADRLDLLEQGDVKAASLHLAIHINGTQVQNESEGFLAIEGSAGTSVGNSAQRNLGGEATWKTGQRMA
|
|
