Name : topB
Accession : AAN62194.1
PAI name : PAGI-2(C)
PAI accession : AF440523
Strain : Pseudomonas aeruginosa B136-33
Virulence or Resistance: Not determined
Product : putative DNA topoisomerase III
Function : -
Note : similar to Xylella fastidiosa XF1776 and Pseudomonas aeruginosa SG17M ORF SG96
Homologs in the searched genomes : 188 hits ( 188 protein-level )
Publication :
-Larbig,K.D., Christmann,A., Johann,A., Hartsch,T., Merkl,R., Klockgether,J., Fritz,H.-J. and Tuemmler,B., "Direct Submission", Submitted (30-OCT-2001) Klinische Forschergruppe, Medizinische Hochschule Hannover, Carl-Neuberg-Strasse 1, Hannover 30623, Germany.
-Larbig,K.D., Christmann,A., Johann,A., Klockgether,J., Hartsch,T., Merkl,R., Wiehlmann,L., Fritz,H.J. and Tummler,B., "Gene islands integrated into tRNA(Gly) genes confer genome diversity on a Pseudomonas aeruginosa clone", J. Bacteriol. 184 (23), 6665-6680 (2002) PUBMED 12426355.
| DNA sequence : | |
ATGCGGCTGTTCTTGTGCGAGAAGCCCTCCCAGGGCAAAGACATTGGCCGGATTCTCGGCGCCACGCAGCGCGGTGAAGG
CTGCCTCAACGGTTCCGGCGTCACGGTCACCTGGTGCATCGGCCATCTCGTGGAGGCGGCGCCGCCCGAGGCCTACGACG
AGCAGCTCAAACGATGGTCCGTTGAGCAGTTGCCCATCATTCCCCAGCACTGGCGGGTCGAGGTCAAACCGAAGACCGCC
ACGCAATTCAAGGTCGTCAAGGCGCTCTTGGCGAAGGCGACTCACCTGGTTATCGCCACCGATGCCGACCGCGAGGGCGA
ATTGATCGCCCGCGAGATCGTGGAGCTTTGCGGCTACCGCGGCCCCATCGAACGCCTGTGGCTGTCGGCGCTCAACGATG
CGTCCATTCGGGCGGCACTGGGCAAGCTGCGGCCTTCGGCCGAGACGCTTTCGATGTACCACTCGGCGCTGGCGCGCTCC
CGTGCGGATTGGCTCGTGGGCATGAACCTGAGCCGGCTGTTCACGGTGCTGGGGCGACAGGCGGGTTACGACGGCGTGCT
GTCGGTCGGCCGCGTACAGACCCCGACGCTCAAGCTCGTTGTGGACCGCGACCGCGAGATCGCGCGCTTCGTGTCCGTAC
CATACTGGGCCATCGCCGTGTCCCTGTTCGCAGGCGGTTCGACTTTCGCCGCGCAATGGGTTCCACCCGATGCGTGCACC
GACGACGCAGGCCGCTGCCTGCGGCAGCCGGTCGCACAGCAGACCATGCAGCAGATCCGCGCTGCGGGCAGTGCCCACGT
CGTGTCGGTGGAGACTGAGCGTGTCCGCGAAGGCCCGCCGCTGCCGTTCGACCTGGGCACCTTGCAGGAAGTGTGTTCCA
AGCAGCTTGGGCTGGACGTGCAGGAAACCTTGGAGATTGCCCAAGCCCTGTACGAGACGCACAAGGCCACGACGTACCCC
CGCTCGGACTCCGGCTACCTGCCCGAGAGCATGTTTGCCGAAGTGCCCACCGTTCTCGACAGCCTGCTCAAGACCGATCC
CTCGCTGCGCTCGATCATGGGCCAGCTCGACCGCTCGCAGCGCTCGCGCGCCTGGAACGATGGCAAGGTCACGGCGCACC
ACGGCATCATCCCGACGCTCGAACCGGCGAAGCTCTCCGCCATGAGCGAGAAGGAACTGGCCGTGTACAGGCTCATCCGG
TCGCATTACCTGGCGCAGTTCCTCCCTCACCACGAGTTCGACCGCACTGTGGCCAAGTTTTCGTGCGGGGGGCAGAACCT
GGCGGCCACGGGCAAGCAGGTTGTCATCCCGGGTTGGCGCCAGGTGCTCGCCGAGCCGCAGGCCGAAGACGGTGATGGCG
AGGGCGATACTGCGGTCCGCGCCCAGGTGCTGCCCGCGCTGCCGAAACTGTATGAGGGCCTGGCATGCCAGGTGGCCGAC
GTCGATCTCAAGGCACTCAAGACGCTGCCGCCCAAACCGTACACGCAAGGCGAGTTGGTCAAGTCCATGAAAGGCGTCGC
CAAGCTGGTGTCCGATCCCCGCCTGAAGCAGAAGCTCAAGGATACGGTTGGCATCGGCACCGAAGCGACGCGGGCCAACA
TCATCGGCGGCCTGATCGCTCGCGGCTACCTCGTGAAGAAGGGGCGCGCCATCCGCGCCTCGGATGCGGCTTTCACTTTG
ATCGATGCCGTGCCTGCGGCGATTGCCGACCCTGGCACCACCGCCGTCTGGGAACAGGCGCTCGACATGATCGAGGCCGG
ACAGCTCACCCTGGACGTGTTCATCGGCAAGCAGGCCGCGTGGATTTCGCAGTTGATTGCGCAGTACGGCAGCGCCTCCC
TGTCCATCAAGGTTCCCCAAGGGCCGGCATGCCCGCAGTGCGGCGCACCCACGCGCCAGCGCAGCGGCAAGAGCGGCCCG
TTCTGGTCGTGCAGCCGCTACCCGGACTGCAAAGGCACGCTGCCAGTCGAATCCGGCAGCTCCAAGCGCGGCGCCTCGCG
CCCGCGCCGTAGCGGCCGCAAAGGCTCCTGA
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| Protein sequence : | |
MRLFLCEKPSQGKDIGRILGATQRGEGCLNGSGVTVTWCIGHLVEAAPPEAYDEQLKRWSVEQLPIIPQHWRVEVKPKTA
TQFKVVKALLAKATHLVIATDADREGELIAREIVELCGYRGPIERLWLSALNDASIRAALGKLRPSAETLSMYHSALARS
RADWLVGMNLSRLFTVLGRQAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPYWAIAVSLFAGGSTFAAQWVPPDACT
DDAGRCLRQPVAQQTMQQIRAAGSAHVVSVETERVREGPPLPFDLGTLQEVCSKQLGLDVQETLEIAQALYETHKATTYP
RSDSGYLPESMFAEVPTVLDSLLKTDPSLRSIMGQLDRSQRSRAWNDGKVTAHHGIIPTLEPAKLSAMSEKELAVYRLIR
SHYLAQFLPHHEFDRTVAKFSCGGQNLAATGKQVVIPGWRQVLAEPQAEDGDGEGDTAVRAQVLPALPKLYEGLACQVAD
VDLKALKTLPPKPYTQGELVKSMKGVAKLVSDPRLKQKLKDTVGIGTEATRANIIGGLIARGYLVKKGRAIRASDAAFTL
IDAVPAAIADPGTTAVWEQALDMIEAGQLTLDVFIGKQAAWISQLIAQYGSASLSIKVPQGPACPQCGAPTRQRSGKSGP
FWSCSRYPDCKGTLPVESGSSKRGASRPRRSGRKGS
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