Name : int
Accession : AAN62094.1
PAI name : PAGI-2(C)
PAI accession : AF440523
Strain : Pseudomonas aeruginosa B136-33
Virulence or Resistance: Not determined
Product : putative integrase
Function : -
Note : bacteriophage P4 integrase subfamily; similar to Xylella fastidiosa XF1718 (int) and Pseudomonas aeruginosa SG17M ORF SG1
Homologs in the searched genomes : 42 hits ( 42 protein-level )
Publication :
-Larbig,K.D., Christmann,A., Johann,A., Hartsch,T., Merkl,R., Klockgether,J., Fritz,H.-J. and Tuemmler,B., "Direct Submission", Submitted (30-OCT-2001) Klinische Forschergruppe, Medizinische Hochschule Hannover, Carl-Neuberg-Strasse 1, Hannover 30623, Germany.
-Larbig,K.D., Christmann,A., Johann,A., Klockgether,J., Hartsch,T., Merkl,R., Wiehlmann,L., Fritz,H.J. and Tummler,B., "Gene islands integrated into tRNA(Gly) genes confer genome diversity on a Pseudomonas aeruginosa clone", J. Bacteriol. 184 (23), 6665-6680 (2002) PUBMED 12426355.
| DNA sequence : | |
ATGGCACTCTCTGATCTGACCGTGCGGCAAGCCAAGGCCGCCAAGAAAACCTACAGCATCCCCGATACCGATGGCCTCGG
CCTGGTGGTCGCCCCCACCGGCGGCAAATCGTGGCACCTGCGCTACTACTGGCTCGGCAAGCAAAAACGCATATCCCTGG
GCAACTATCCCGAGATCGGCCTGCGCGAAGCCCGCACCTTGCGCGACGAAGCCAGGGCGCTCCTGGCCCAAGGCATCAAC
CCCCACACCGACCGCAAGCAGAAACGGCATGCGGTCAAGCTGGCCTCGGACTACACATTCAAGGCAGTCTTCGATGCTTG
GGTCGAGCACCGCGCCAAGGAACTCAAGGAAGGCCGGAACAGCACACTGTCGCAGATCAAGCGGATCTTCGAGAAAGACG
TGCTGCCCAGCCTCAAGCAGATGTCGATCTATGACATTCGCAGGCCGCAACTCCTGGGCGTCCTGGCGCGGATCGAGAAG
CGCGAGGCCTTCACCACTGCCGAAAAGGTCCGGACCTGGCTGGGGCAGCTATTCCGCTATGCGCTCGTCATCGTCGAGGG
CATGGAGGCCAATCCGGCCACGGACCTGGACGTAGTGGCCGAGCCCAAGCCCGCGGTGACCCATAACCCCTACCTGCACC
TGCCCGAGCTTCCCGAGTTCCTCCAGAAGCTCAGGCTCTACAACCCGCGCGGCTGGCAAACCCAGCTCGGTATCCGCCTG
CTGTTCTTGACCGGCGTGCGCACCGGCGAACTGCGGCTGGCGACCCCGGATCAGTTCGACCTCGACCGTGGGCTTTGGAT
CATCCCCCCGCAGATCGTCAAGCAGCTTCAGGACGAGATGCGCAAAGCGGGGAAGCGGCCGCAGGACGTACCGCCCTACA
TCGTGCCGCTGTCCCTTCAGGCCATCGAGATCGTGCGCTACCTCCTGGGGGTGATGCGGCCCGCCCAGCGCCACCTGCTG
ACGCACCGCAGCGAACTCAAGAAGCGCATCAGCGAGAACACGCTCAACGCCGCCTTGAAGCGGATGGGCTACGAGGACAA
ACTGACCGGCCACGGTATTCGTGGAACCATCTCGACGGCACTCAACGAGATCGGCTATCCCAAGATTTGGGTGGACGCGC
AGCTTTCGCATTCCGACCCAAACAAGGTGAGTTCGGCCTACAACCACGCCAAGTACGTGGAACCGCGCCGCCGGATGATG
CAGGACTGGGCCGACCGCCTCGACTTGCTCGAACAGGGCCAAGTCGAAGCGGCCAGCGCGCACCTCACTATCCACATCGA
GGGCGTACCGGCCATGGCGGAGGAGGACAAGCCCGACGCCATCGTTGCAGCTTCCTCTGCGCCTCCCGTTCCGCCGGTGG
TGGCCACCCCCATCGTCGTGACGCCGAACGAAGGGGGCATCACCTTCCAACGGTTGTCGCAGGTGCCGCCATCCCCGACT
CATGCGCCAGAACCCGAGGTGTCGGCCATCCAGCGCGAGCGCGAGGAAATGCTGGCCATCTACGAATCGCCGAGCAGTCT
GCCGGTGCCCCTGTTCGGCAAGTTGGCTGGAAAGTCCAAGGACCAGATCAACCGCGAGTTGAAGGCGGGCAAGCTGCTCT
CCATCAGCCTGGGCAACCGGGGGCAGCGAGTTCCCGATTGGCAACTGGTGCCGCTCAAACACAAGCTGGCCCAGGTGCTC
ATGCGCCAGTACCCCCAGGCGGATTCATGGGAGCTTTACCGCATGCTGACCCAGCCACATCCCGACCTGGGTGACCGCGC
GGCCATCGACATCGTGACGCCAAGCAATCTGGGCATGGTGGTACAGATCATCGCAGGCAGCGAGCCACATGCGAATGCTC
CCGAGGTCGTACCGCCGCGGCCTATCTCCGAAGAGGTGCGCCAGAGTGTTCGCCGGCTGATGGAGAGCGCTGTCGCCTTG
GACGGCGCATAG
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| Protein sequence : | |
MALSDLTVRQAKAAKKTYSIPDTDGLGLVVAPTGGKSWHLRYYWLGKQKRISLGNYPEIGLREARTLRDEARALLAQGIN
PHTDRKQKRHAVKLASDYTFKAVFDAWVEHRAKELKEGRNSTLSQIKRIFEKDVLPSLKQMSIYDIRRPQLLGVLARIEK
REAFTTAEKVRTWLGQLFRYALVIVEGMEANPATDLDVVAEPKPAVTHNPYLHLPELPEFLQKLRLYNPRGWQTQLGIRL
LFLTGVRTGELRLATPDQFDLDRGLWIIPPQIVKQLQDEMRKAGKRPQDVPPYIVPLSLQAIEIVRYLLGVMRPAQRHLL
THRSELKKRISENTLNAALKRMGYEDKLTGHGIRGTISTALNEIGYPKIWVDAQLSHSDPNKVSSAYNHAKYVEPRRRMM
QDWADRLDLLEQGQVEAASAHLTIHIEGVPAMAEEDKPDAIVAASSAPPVPPVVATPIVVTPNEGGITFQRLSQVPPSPT
HAPEPEVSAIQREREEMLAIYESPSSLPVPLFGKLAGKSKDQINRELKAGKLLSISLGNRGQRVPDWQLVPLKHKLAQVL
MRQYPQADSWELYRMLTQPHPDLGDRAAIDIVTPSNLGMVVQIIAGSEPHANAPEVVPPRPISEEVRQSVRRLMESAVAL
DGA
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