PAI Gene Information


Name : cagF
Accession : AAN34515.1
PAI name : cag PAI
PAI accession : AY136643
Strain : Helicobacter pylori 2017
Virulence or Resistance: Virulence
Product : putative outer membrane protein CagF
Function : -
Note : -
Homologs in the searched genomes :   45 hits    ( 45 protein-level )  
Publication :
    -Seydel,A. and Tasca,E., "Direct Submission", Submitted (26-JUL-2002) Dept. of Biomedical Experimental Science, University of Padua, Viale G. Colombo 3, Padua 35121, Italy.

    -Seydel,A., Tasca,E., Berti,D., Rappuoli,R., Del Giudice,G. and Montecucco,C., "Characterization and immunogenicity of the CagF protein of the cag pathogenicity island of Helicobacter pylori", Infect. Immun. 70 (11), 6468-6470 (2002) PUBMED 12379730.


DNA sequence :
ATGAAACAAAATTTGCGTGAACAAAAATTATTGAAAATTTTAGAAAATGATGTCTTGACGATTTTGGATAGTTTTTCTAA
TTATCTTTTTGAACTGAAAGAAGAATTGGACTTCATAGAAGAAGAAATGGAAGGCGAAATCACTGAACAAAACCTTACCA
CTCTTTATGATTTTTCTAATTTCTTAGAAGACCATGTCAATGTGTTTTATGAGAATGTTTTAAATATAGATGATGTCAAA
ACAGAGCACCTTTATTCAGGTCTCATAGATAGTCTCAACGCTAATCTTCACTTTGTCAAGTCATTTCTCAGTAATCAGGA
TTTAGACTTCCGCTTTTTTAAAGAAATAAACGATGGGCAAGATCCCCAAAAAACATTATCAAGATTAATTCCTCTTCAAA
GTGGGAAAAACGATGCAAGCTCGTTTAAAGCAAATAATTCTTTTGTCTCATTAGTTTATGTTTATGTTCACCTCATGCTA
GAAACTATCATGCAGTCGTATAGGATTCTCAGGTTACTAGAAAAACCTATCAATAACAACATAAGCGAGGATATGCAGAG
CGATATAGAGAATTTTTTTGTTCAAGCGAATTTTTTAGAATACTATGTTCAGAACAAAATATACCCAAAAAATCATGCCT
ATGACTTCACGCATTTAATCATGGACTCCATTGTTCCTAATTGGATTCAAATTGATATGAGCGTTGAAGCTAAAAAGAAA
GAGCTTTTTGAAAAATATTTTCAAAACATTGATGAAGTAACAAACAAAATGCTCGATCAAAAAAATCAAAACAAAAATAA
CGATTGA

Protein sequence :
MKQNLREQKLLKILENDVLTILDSFSNYLFELKEELDFIEEEMEGEITEQNLTTLYDFSNFLEDHVNVFYENVLNIDDVK
TEHLYSGLIDSLNANLHFVKSFLSNQDLDFRFFKEINDGQDPQKTLSRLIPLQSGKNDASSFKANNSFVSLVYVYVHLML
ETIMQSYRILRLLEKPINNNISEDMQSDIENFFVQANFLEYYVQNKIYPKNHAYDFTHLIMDSIVPNWIQIDMSVEAKKK
ELFEKYFQNIDEVTNKMLDQKNQNKNND