Name : unnamed
Accession : AAL67338.1
PAI name : PAI II CFT073
PAI accession : AF447814
Strain : Escherichia coli 042
Virulence or Resistance: Not determined
Product : putative transposase
Function : -
Note : ORF6; similar to Shigella sonnei transposase encoded by GenBank Accession Number AB029445
Homologs in the searched genomes : 12 hits ( 9 protein-level, 3 DNA-level )
Publication :
-Rasko,D.A., Phillips,J.A., Li,X. and Mobley,H.L., "Identification of DNA sequences from a second pathogenicity island of uropathogenic Escherichia coli CFT073: probes specific for uropathogenic populations", J. Infect. Dis. 184 (8), 1041-1049 (2001) PUBMED 11574920.
-Rasko,D.A., Phillips,J.A., Li,X. and Mobley,H.L.T., "Direct Submission", Submitted (14-NOV-2001) Dept of Microbiology and Immunology, University of Maryland School of Medicine, 655 W. Baltimore Street, Baltimore, MD 21201, USA.
| DNA sequence : | |
ATGCCGATCATAGCACCAATTTCCCGTGACGAACGACGCCTGATGCAGAAAGCCATCCATAAAACACACGATAAAAATTA
TGCCCGCAGACTGACTGCCATGCTGATGCTGCACCGGGGCGACCGTGTCAGCGACGTTGCCAGAACGCTCTGCTGCGCCC
GTTCCTCTGTTGGACGCTGGATTAACTGGTTCACGCAGTCGGGTGTTGAGGGACTGAAATCATTACCTGCCGGGCGTGCC
CGTCGCTGGCCGTTTGAGCATATCTGCACACTGTTACGTGAGCTGGTAAAACATTCTCCCGGCGACTTTGGCTACCAGCG
TTCACGCTGGAGTACAGAACTGCTGGCAATAAAAATCAATGAGATAACCGGTTGCCAGTTAAATGCCGGAACCGTTCGCC
GCTGGTTGCCGTCTGCGGGGATTGTGTGGCGAAGGGCTGCGCCAACTCTGCGTATCCGTGACCCGCATAAAGATGAAAAG
ATGGCAGCAATCCATAAAGCACTGGACGAATGCTGCGCAGAGCATCCGGTCTTTTATGAAGATGAAGTGGATATCCATCT
TAATCCCAAAATCGGTGCGGACTGGCAACTGCGCGGACAGCAAAAACGGGTGGTCACGCCGGGACAGGTAAAGCCAGCTA
TGTGGGCGGCAACAGCAAAAGTTCGGCGCTGTTCATCAGCCTGCTGA
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| Protein sequence : | |
MPIIAPISRDERRLMQKAIHKTHDKNYARRLTAMLMLHRGDRVSDVARTLCCARSSVGRWINWFTQSGVEGLKSLPAGRA
RRWPFEHICTLLRELVKHSPGDFGYQRSRWSTELLAIKINEITGCQLNAGTVRRWLPSAGIVWRRAAPTLRIRDPHKDEK
MAAIHKALDECCAEHPVFYEDEVDIHLNPKIGADWQLRGQQKRVVTPGQVKPAMWAATAKVRRCSSAC
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