Name : unnamed
Accession : AAL57566.1
PAI name : LEE
PAI accession : AF453441
Strain : Escherichia coli 042
Virulence or Resistance: Not determined
Product : putative enterotoxin
Function : -
Note : RorfF
Homologs in the searched genomes : 14 hits ( 13 protein-level, 1 DNA-level )
Publication :
-Tauschek,M., Strugnell,R.A. and Robins-Browne,R.M., "Characterization and evidence of mobilization of the LEE pathogenicity island of rabbit-specific strains of enteropathogenic Escherichia coli", Mol. Microbiol. 44 (6), 1533-1550 (2002) PUBMED 12067342.
-Tauschek,M., Strugnell,R.A. and Robins-Browne,R.M., "Direct Submission", Submitted (30-NOV-2001) Microbiology and Immunology, University of Melbourne, Melbourne, Victoria 3010, Australia.
| DNA sequence : | |
ATGCCAATAATAAACAAATCGGCATCAAATTATGTTGAATATATTTCAAAAAACAATCCCCCTTATTTATCAAAAAAGAG
AGATGCCAGTATAAATCTAAATGGAAAGGTTAGTGATTGCAATGGGGAAATCATATGGTGTCGACATATAGCATCATATT
GGAGTGAGTTTTTTTGTAGTAATTCAGGAAAGATAGACTACGAAACATTTTCATCCCCTCAATTATTAAGCAAAGCTATT
GTAATTCAGGAAAACAAGGGGACAAATAATATTAAGGGTGATGTGTATTTTGTTGAAAATGAATCTTGGGGAAGCGTTAT
ATATAACCTTTTTCTTCAACTTGAGAAAGAGAATAAATCTCACACATCATTAGAAGTTCATTCTCCCGGACATGCAATGG
CTCTGGGCATTAAAATAAAAAACGACAAGGAAAATAAGTTTGTTATTAATTTCTATGATCCCAATCAGACCGCGACGCAT
AAACGAGTATTTTTTTGCACTAATAACATTTGTGATATAATAAACCTGACAGCATATGATTTTCTTAGTGAGCAATGTCT
GAAATGTTATGGGCTAAAAGAAGACACACTGTCACTTTTTGTGGATAAAACAAAATCGAATGACAACAATAATGTGTTTA
TAAAAAAATTACCTGATAATATTCTCCAAGGTGTTGTTATTAATTTTGCTATGGGAGCAGGACTAAGAGAGATAATAAAA
AAGGTATATAACGATACTCGATTTACAGATCTTACAAAATCTCAGATGAAAATCTTGTGTGAATCAAAAAATGTTAATAA
TGTTCCTGGGTTGCTTTTAGCTCTACAAAATGGACATGATAATGTAATTGATGAATATGGTACTTTAATTAAAAAGTCAA
ATCTTAATAAAGAAGAATTAATACATATATTATCTGCAAGAACTTTGGATGGAACCATACCTGGTTTATATCAGGCCCTT
CAAAATGGACATGCTCAAGCTATTAAGAGTTATGGTAACTTAGTTCTGGATACTATTGATAAAAATATAGATTTAGAGTA
TTTGCTTTCAGCATTTAAATATGAGGCACATAGCTCTAATAAATATACTCCTGGATTATTTTCTGCATTTCAAAATGGTC
ATGCAGACGCAATAAAGGCATATTGTGGCGTACTTGGCAATAGTAATTTGAAAAGAGGTGAGATAATCAGGATGCTTGAG
GCGAGAAATTATGATGGTGCACCAGGATTACTTCTTGCGTATCAAAATGGAGATATTAATACGATTCAGTCTTTTTTTGA
CTCACTAATAATGTTAGATATATCAAAGGATTTTATCGAAGAGTTATTGACTGCAAAACATTATGATTTTACGGGGTTAT
CATTAGCGATCAGTCATAGACATGATCATGTTGTCAAATTATACGGAAAGTTATTTAAAAAACTTGATACCAGTCCATAT
AAAATGTCAATTATCCTAGCATTAGCAATTGATTGCGAGAGAAATAATGCAAACATAATTATTGATAGTGAGTACAAGTC
AAATAAGGCAGTAAAGGAATATGTAGAAATTTTAAAAGAATTCAATATATGCCCAGAAAAGGTAGCAGAATACCTAAGCG
AGTTCAGCGGAAAACATTTCCTCGATGTATATAATTATTATTCCAATTGA
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| Protein sequence : | |
MPIINKSASNYVEYISKNNPPYLSKKRDASINLNGKVSDCNGEIIWCRHIASYWSEFFCSNSGKIDYETFSSPQLLSKAI
VIQENKGTNNIKGDVYFVENESWGSVIYNLFLQLEKENKSHTSLEVHSPGHAMALGIKIKNDKENKFVINFYDPNQTATH
KRVFFCTNNICDIINLTAYDFLSEQCLKCYGLKEDTLSLFVDKTKSNDNNNVFIKKLPDNILQGVVINFAMGAGLREIIK
KVYNDTRFTDLTKSQMKILCESKNVNNVPGLLLALQNGHDNVIDEYGTLIKKSNLNKEELIHILSARTLDGTIPGLYQAL
QNGHAQAIKSYGNLVLDTIDKNIDLEYLLSAFKYEAHSSNKYTPGLFSAFQNGHADAIKAYCGVLGNSNLKRGEIIRMLE
ARNYDGAPGLLLAYQNGDINTIQSFFDSLIMLDISKDFIEELLTAKHYDFTGLSLAISHRHDHVVKLYGKLFKKLDTSPY
KMSIILALAIDCERNNANIIIDSEYKSNKAVKEYVEILKEFNICPEKVAEYLSEFSGKHFLDVYNYYSN
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