Name : tir
Accession : AAL57549.1
PAI name : LEE
PAI accession : AF453441
Strain : Escherichia coli 042
Virulence or Resistance: Virulence
Product : Tir
Function : -
Note : translocated intimin receptor
Homologs in the searched genomes : 12 hits ( 12 protein-level )
Publication :
-Tauschek,M., Strugnell,R.A. and Robins-Browne,R.M., "Characterization and evidence of mobilization of the LEE pathogenicity island of rabbit-specific strains of enteropathogenic Escherichia coli", Mol. Microbiol. 44 (6), 1533-1550 (2002) PUBMED 12067342.
-Tauschek,M., Strugnell,R.A. and Robins-Browne,R.M., "Direct Submission", Submitted (30-NOV-2001) Microbiology and Immunology, University of Melbourne, Melbourne, Victoria 3010, Australia.
| DNA sequence : | |
ATGCCTATTGGTAATCTTGGCCACAATTCCAATGTGAGAGCTTTAATTCCACCTGCACCGCCATTACCTTCACAAACCGA
CGGTGCAGGAGGTGCCCGTAATCAGCTCATTAACTCAAATGGCCCGATGGGGTCTCGTTTGCTATTTACGCCTATCAGGA
ATTCTGTTGCTGATGCTGCTGATTCTCGTGCCAGTGATATTCCCGGACTTCCTACAAATCCACTGCGCTTTGCTGCGTCC
GAGGTATCTTTGCATGGTGCGCTTGAAGTTCTTCATGATAAAGGGGGGCTTGATACTCTTAACTCTGCTATTGGATCTTC
GTTATTCCGTGTTGAAACTCGGGATGATGGCAGCCATGTTGCTATCGGGCAAAAAAATGGCCTCGAGACCACTGTTGTTT
TAAGTGAGCAAGAGTTTTCTAGCTTACAGTCCCTTGATCCTGAAGGTAAAAACAAATTTGTATTTACTGGAGGCCGCGGT
GGCGCAGGGCATGCTATGGTCACGGTTGCTTCAGATATCGCCGAAGCCCGTCAGAGGATAATAGATAAATTAGAACCAAA
GGATACAAAGGAGACGAAGGAGCCAGGGGATCCAAATAGTGGCGAGGGAAAAATCATTGAAATTCATACCTCAACCTCAA
CTTCTAGCCTCCGTGCAGATCCTAAACTTTGGTTGTCATTGGGGACTATTGCTGCAGGTCTGATAGGGATGGCTGCGACG
GGGATTGCACAGGCTGTTGCGTTGACTCCAGAGCCGGATGACCCAATCACTACCGACCCTGATGCTGCAGCAAACACAGC
TGAAGCAGCGGCAAAAGATCAGTTAACGAAAGAAGCATTCCAGAACCCAGATAACCAGAAAGTTAATATCGATGAGAACG
GAAATGCAATTCCGTCCGGGGAACTAAAAGATGATGTTGTTGCGCAAATAGCAGAACAAGCTAAAGCGGCGGGTGAACAG
GCCAGACAGGAAGCTATTGAAAGTAATTCTCAGGCGCAGCAAAAATATGATGAACAGCATGCTAAACGCGAACAGGAAAT
GTCTCTTTCATCGGGGGTTGGCTACGGTATTAGTGGTGCGCTGATTCTTGGCGGGGGAATTGGTGCCGGTGTTACTGCTG
CTCTTCATCGGAAAAACCAACCGGCAGAACAAACAATCACTACACGTACGGTAGTCGATAATCAGCCTACGAATAACGCA
TCTGCGCAGGGCAATACTGACACAAGTGGGCCAGAAGAGTCCCCGGCGAGCAGACGTAATTCGAATGCCAGCCTCGCATC
GAACGGGTCTGACACCTCCAGCACGGGCACGGTAGAGAATCCGTATGCTGACGTTGGAATGCCCAGAAATGATTCACTGG
CTCGCATTTCAGAGGAACCTATTTATGATGAGGTCGCTGCAGATCCTAATTATAGCGTCATTCAACATTTTTCAGGGAAC
AGCCCAGTTACCGGAAGGTTAGTGGGAACCCCAGGGCAAGGTATCCAAAGTACTTATGCGCTTCTGGCAAGCAGCGGCGG
ATTGCGTTTAGGTATGGGAGGATTAACGGGGGGGGGCGAGAGCGCAGTAAGTACTGCCAATGCCGCACCAACGCCGGGAC
CCGCACGTTTCGTTTAA
|
| Protein sequence : | |
MPIGNLGHNSNVRALIPPAPPLPSQTDGAGGARNQLINSNGPMGSRLLFTPIRNSVADAADSRASDIPGLPTNPLRFAAS
EVSLHGALEVLHDKGGLDTLNSAIGSSLFRVETRDDGSHVAIGQKNGLETTVVLSEQEFSSLQSLDPEGKNKFVFTGGRG
GAGHAMVTVASDIAEARQRIIDKLEPKDTKETKEPGDPNSGEGKIIEIHTSTSTSSLRADPKLWLSLGTIAAGLIGMAAT
GIAQAVALTPEPDDPITTDPDAAANTAEAAAKDQLTKEAFQNPDNQKVNIDENGNAIPSGELKDDVVAQIAEQAKAAGEQ
ARQEAIESNSQAQQKYDEQHAKREQEMSLSSGVGYGISGALILGGGIGAGVTAALHRKNQPAEQTITTRTVVDNQPTNNA
SAQGNTDTSGPEESPASRRNSNASLASNGSDTSSTGTVENPYADVGMPRNDSLARISEEPIYDEVAADPNYSVIQHFSGN
SPVTGRLVGTPGQGIQSTYALLASSGGLRLGMGGLTGGGESAVSTANAAPTPGPARFV
|
|
