Name : escV
Accession : AAL57541.1
PAI name : LEE
PAI accession : AF453441
Strain : Escherichia coli 042
Virulence or Resistance: Virulence
Product : EscV
Function : -
Note : type III secretion protein
Homologs in the searched genomes : 125 hits ( 125 protein-level )
Publication :
-Tauschek,M., Strugnell,R.A. and Robins-Browne,R.M., "Characterization and evidence of mobilization of the LEE pathogenicity island of rabbit-specific strains of enteropathogenic Escherichia coli", Mol. Microbiol. 44 (6), 1533-1550 (2002) PUBMED 12067342.
-Tauschek,M., Strugnell,R.A. and Robins-Browne,R.M., "Direct Submission", Submitted (30-NOV-2001) Microbiology and Immunology, University of Melbourne, Melbourne, Victoria 3010, Australia.
| DNA sequence : | |
ATGAATAAACTCTTAAATATATTTAAAAAAGCAGAGTCATATCACGATCTTATTCTGGCTCTCTTCTTCTTTATGGCTGT
AATGATGATGATTATTCCATTGCCAACAGTTGTGGTGGATATCATTATCGCGATTAATATATCGACAGCGTTGCTTTTAT
TAATGCTCTCAATCTATATAAAAAATCCTCTTGAGCTAACTTCTTTTCCTACAATCCTGTTGATTACGACGTTGATGCGC
CTGTCGCTCAGTGTTAGTACAACCAGACTTATTCTGCTGCATCACGATGCGGGTGACATTATTTACTCCTTCGGTAACTT
TGTTGTTGGCGGTAATATTGTTGTTGGCCTGGTTATTTTTACCATTATCACCATTGTACAATTTATGGTTATTACAAAAG
GGGCTGAGCGTGTTGCTGAAGTGAGTGCTCGTTTTTCCCTTGATGGTATGCCAGGAAAACAAATGAGTATTGATGGTGAT
ATGCGCGCAGGCGTTATTGATCCGCTTGAGGCAAAAGTTCTTCGCTCCCGAGTGCAAAAGGAAAGCCAGTTTTATGGTTC
AATGGACGGGGCGATGAAGTTTGTAAAAGGGGACGCTATTGCCGGTATCATCATTGTTTTAGTTAACCTGTTTGGTGGCG
TGCTCATTGGAATGTGGCAATTTGACATGCCATTTAGTGAAGCACTTAGCCTGTTTTCTGTATTGTCTGTCGGTGATGCT
TTAGTTGCCCAGATCCCTGCGCTTATTATTTCCGTCACTGCGGGGGTTGTTGTTACTCGTGTTCCCGGTGAAAGCGAAAA
AGAAGAAAACCTTGCAGGTGATATTGTTCAACAGGTTTCTGTTAATAGTCGCCCTTTTTTAATCAGTGCCGCACTCATGA
TCGTAATGGCGATTATTCCTGGCTTTCCTACATTGGTCTTCTTGTTTCTGGCGGTTTGCCTGTTGGGTATCGCCTGGAAA
TTACAAAAGAAAAGAACGTTTGGAACCGGAAATAATAAGGACGCTATGGGAGCTGATTTGTCTAATAGTCAAAATATCTC
ACCGGGTGCCGAGCCGTTGATTTTAAACTTAAGTAGTAATATTTATAGCTCAGATATTACACAGCAGATTGAGGTTATGC
GTTGGAATTTCTTTGAGGAAAGTGGAATTCCATTGCCTAAGATTATTGTTAATCCAGTTAAAAATAATGATAGCGCTATA
GAATTTTTGCTCTATCAAGAGTCAATATACAAAGATACTCTTACAGATGATACTGTTTATTTTGAGGCTGGGCATGCAGA
GATATCATTTGAATTTGTCCAGGAAAAGCTTTCGGCTAACTCTATCGTGTATAAAACGAATGAGGCTAACCAACAACTAG
CTCACGTCTCAGGTATGGATGTTTATGCAAAAACAAATGACAAGATAACGTTTTTGCTAAAGAAACTTGTATTGTCTAAT
GCCAAAGAGTTCATCGGCGTACAAGAAACGCGTTATCTGATGGACATCATGGAGAGGAAATATAACGAACTTGTGAAAGA
GCTTCAGCGTCAGCTTGGTCTGAGCAAGATTGTGGATATTCTTCAGCGTCTCGTAGAGGAAAATATCTCAATTAGAGATC
TACGAACTATTTTTGAAACGCTTATTTTTTGGTCCACAAAAGAAAAAGATGTGGTTATCTTGTGCGAATACGTTCGTATC
GCCCTCCGTCGGCATATTTTAGGTCGCTATAGCGTTCGCGGTACACTTCTGAATGTCTGGCTTATTGGCTCTGATATTGA
AAATGAGTTACGAGAGTCGATCAGACAAACGTCATCAGGTTCGTATTTGAATATCTCACCGGAGCGAAGTGAGCAGATTA
TTGGCTTCTTAAAAAATATTGTGAATCCAACGGGGAATGGCGTCATTCTGACCGCTTTAGATATCAGGCGCTATGTGAAG
AAAATGATTGAAGGTTCGTTCCCGTCAGTCCCCGTGCTCTCTTTTCAGGAAGTTGGGAATAATATCGAACTTAAAGTATT
AGGAACGGTAAATGATTTTAGAGCATGA
|
| Protein sequence : | |
MNKLLNIFKKAESYHDLILALFFFMAVMMMIIPLPTVVVDIIIAINISTALLLLMLSIYIKNPLELTSFPTILLITTLMR
LSLSVSTTRLILLHHDAGDIIYSFGNFVVGGNIVVGLVIFTIITIVQFMVITKGAERVAEVSARFSLDGMPGKQMSIDGD
MRAGVIDPLEAKVLRSRVQKESQFYGSMDGAMKFVKGDAIAGIIIVLVNLFGGVLIGMWQFDMPFSEALSLFSVLSVGDA
LVAQIPALIISVTAGVVVTRVPGESEKEENLAGDIVQQVSVNSRPFLISAALMIVMAIIPGFPTLVFLFLAVCLLGIAWK
LQKKRTFGTGNNKDAMGADLSNSQNISPGAEPLILNLSSNIYSSDITQQIEVMRWNFFEESGIPLPKIIVNPVKNNDSAI
EFLLYQESIYKDTLTDDTVYFEAGHAEISFEFVQEKLSANSIVYKTNEANQQLAHVSGMDVYAKTNDKITFLLKKLVLSN
AKEFIGVQETRYLMDIMERKYNELVKELQRQLGLSKIVDILQRLVEENISIRDLRTIFETLIFWSTKEKDVVILCEYVRI
ALRRHILGRYSVRGTLLNVWLIGSDIENELRESIRQTSSGSYLNISPERSEQIIGFLKNIVNPTGNGVILTALDIRRYVK
KMIEGSFPSVPVLSFQEVGNNIELKVLGTVNDFRA
|
|
