Name : unnamed
Accession : AAL08472.1
PAI name : SRL
PAI accession : AF326777
Strain : Shigella flexneri 2002017
Virulence or Resistance: Not determined
Product : putative autotransporter
Function : -
Note : Orf47; similar to Flu (Ag43) from Escherichia coli
Homologs in the searched genomes : 64 hits ( 64 protein-level )
Publication :
-Luck,S.N., Turner,S.A. and Rajakumar,K., "Direct Submission", Submitted (06-DEC-2000) Microbiology, Monash University, VIC 3800, Australia.
-Luck,S.N., Turner,S.A. and Rajakumar,K., "Direct Submission", Submitted (17-MAY-2002) Microbiology, Monash University, VIC 3800, Australia REMARK Amino acid sequence updated by submitter.
-Luck,S.N., Turner,S.A. and Rajakumar,K., "Direct Submission", Submitted (18-JUN-2002) Microbiology, Monash University, VIC 3800, Australia REMARK Sequence update by submitter.
-Luck,S.N., Turner,S.A. and Rajakumar,K., "Direct Submission", Submitted (19-JAN-2005) Microbiology, Monash University, VIC 3800, Australia REMARK Sequence update by submitter.
-Luck,S.N., Turner,S.A., Rajakumar,K., Sakellaris,H. and Adler,B., "Ferric dicitrate transport system (Fec) of Shigella flexneri 2a YSH6000 is encoded on a novel pathogenicity island carrying multiple antibiotic resistance genes", Infect. Immun. 69 (10), 6012-6021 (2001) PUBMED 11553538.
| DNA sequence : | |
ATGCTGAACACCAGCTACAGGCTGGTATGGAATCACATTACGGGCACCCTGGTGGTGGCTTCCGAACTGGCCCGCTCACG
GGGAAAACGCGCCGGTGTGGCGGTTGTGCTGTCTCTTGCTGCTGTCACATCAATCCCGGCACTGGCTGCTGACACGATTG
AACAGGCGGGAGAAACCGTGAACGGCGGAACACTGACAAATCATGACAACCAGATTGTTCTCGGTACGGCCAACGGAATG
ACCATCAGTAGCGGTCTGGAGTATGGGCCGGATAACGAGGCCAATACCGGCGGGCAATGGATACAAAATGGCGGTATCGC
CAACAACACTACTGTCACCGGTGGTGGTCTTCAGAGAGTGAATGCCGGAGGAAGCGTTTCAGACACGGTTATCAGTGCCG
GAGGCGGACAGAGCCTTCAGGGGCAGGCAGTGAATACCACTCTGAACGGCGGTGAGCAGTGGGTACATGAAGGCGGGATT
GCAACGGGTACCGTCATTAATGAGAAGGGCTGGCAGACCGTCAAATCCGGCGCAATGGCAACCGACACGGTTGTGAATAC
CGGCGCGGAAGGGGGACCAGATGCAGAAAATGGTGATACCGGGCAGTTTGTTCGCGGAAATGCCGTACGTACCACTATCA
ATGAAAATGGTCGTCAGATTGTGGCTGCTGAAGGAACAGCAAATACCACTGTGGTTTATGCCGGCGGCGACCAGACGGTA
CACGGGCATGCGCTGGATACCACACTGAATGGCGGTTACCAGTATGTGCACAACGGCGGTACGGCGTCTGGCACTGTTGT
AAACAGTGACGGCTGGCAGATTATCAAGGAAGGTGGTCTGGCGGATTTCACCACCGTTAACCAGAAAGGCAAACTGCAGG
TGAACGCCGGTGGTACCGCCACACATGTCACCCTGAAACAGGGTGGAGCACTGGTTACCAGTACTGCGGCAACGGTTCTT
GGCAGCAACCGTCTGGGCAATTTCACGGTGGAAAACGGTAAGGCTGACGGAGTTGTTCTGGAGTCCGGCGGTCGCCTGGA
TGTACTGGAAGGCCATTCAGCGCAGAAAACACGGGTGGATGACGGCGGAACCCTGGCAGTGTCTGCCGGTGGTAAGGCAA
CAGGTGTCACCATGACATCCGGTGGTGCCCTGATTGCAGACAGTGGTGCCACTGTTGAGGGGACCAATGCCAGCGGTAAG
TTCAGTATTGATGGCACATCCGGTCAGGCCAGCGGACTGCTGCTGGAAAATGGCGGCAGCTTTACGGTTAATGCCGGAGG
ACTGGCCAGCAACACCACTGTCGGACATCGTGGAACACTGACGCTGGCTGCCGGGGGAAGTCTGAGTGGCAGAACACAGC
TCAGTAAAGGTGCCAGCATGGTACTGAATGGCGATGTGGTCAGTACCGGCGATATTGTTAACGCAGGGGAGATTCGCTTT
GATAATCAGACGACACCGGATGCCGCGCTGAGCCGTGCTGTTGCAAAAGGCGACTCCCCGGTAACGTTCCATAAACTGAC
CACCAGTAACCTCACCGGTCAGGGTGGCACCATCAATATGCGTGTTCGCCTTGATGGCAGCAATACCTCTGACCAGCTGG
TGATTAATGGTGGTCAGGCAACCGGCAAAACCTGGCTTGCGTTTACAAATGTCGGAAACAGTAACCTCGGGGTGGCAACC
TCCGGACAGGGTATCCGGGTTGTGGATGCACAGAATGGCGCCACCACAAAAGAAGGTGCGTTTGCCCTGAGTCGCCCGCT
TCAGGCCGGCGCCTTTAACTACACCCTGAACCGTGACAGCGATGAAGACTGGTACCTGCGCAGTGAAAATGCTTATCGTG
CTGAAGTCCCCCTGTATACATCCATGCTGACACAGGCAATGGACTATGACCGGATTCTGGCAGGCTCCCGCAGCCATCAG
ACCGGTGTAAACGGTGAAAATAACAGCGTCCGTCTCAGCATTCAGGACGGTCATCTCGGTCACGATAACAACGGCGGTAT
TGCCCGTGGAGCCACGCCGGAAAGCAGCGGCAGCTATGGCTTCGTCCGTCTGGAGGGTGACCTGCTGAGAACAGAGGTTG
CCGGTATGTCTCTCACGACAGGGGTGTATGGTGCCGCAGGCCATTCTTCCGTTGATGTTAAGAATGATGACGGTTCCCGC
GCCGGCACGGTCCGGGATGATGCCGGCAGCCTGGGCGGATACCTGAATCTGACACACACGTCCTCCGGCCTGTGGGCTGA
CATTGTGGCACAGGGAACCCGCCACAGCATGAAAGCGTCATCGGACAATAACGACTTCCGTGCCCGGGGCTGGGGCTGGC
TGGGCTCACTGGAAACCGGTCTGCCCTTCAGTATCACTGACAACCTGATGCTGGAGCCACAACTGCACTATACCTGGCAG
GGACTTACCCTGGATGACGGCCAGGATAACGCCGGTTATGTGAAGTTCGGGCATGGCAGTGCACAACATGTGCGTGCCGG
TTTCCGTCTGGGCAGCCACAACGATATGAGCTTTGGTGAAGGCACCTCATCCCGTGACACTCTGCGCGACAGTACAAAAC
ACCGTGTGAGTGAACTGCCGGTGAACTGGTGGGTACAGCCTTCTGTTATCCGCACTTTCAGCTCCCGGGGTGACATGAGC
ATGGGGACAGCCGCCGCCGGCAGTAACATGACGTTCTCACCGTCCCGGAATGGCACGTCACTGGACCTGCAGGCCGGACT
GGAAGCCCGTGTCCGGGAAAATATCACCCTGGGCGTTCAGGCCGGTTATGCCCACAGCGTCAGCGGCAGCAGCGCTGAAG
GTTATAACGGTCAGGCCACGCTGAATGTGACTTTTTGA
|
| Protein sequence : | |
MLNTSYRLVWNHITGTLVVASELARSRGKRAGVAVVLSLAAVTSIPALAADTIEQAGETVNGGTLTNHDNQIVLGTANGM
TISSGLEYGPDNEANTGGQWIQNGGIANNTTVTGGGLQRVNAGGSVSDTVISAGGGQSLQGQAVNTTLNGGEQWVHEGGI
ATGTVINEKGWQTVKSGAMATDTVVNTGAEGGPDAENGDTGQFVRGNAVRTTINENGRQIVAAEGTANTTVVYAGGDQTV
HGHALDTTLNGGYQYVHNGGTASGTVVNSDGWQIIKEGGLADFTTVNQKGKLQVNAGGTATHVTLKQGGALVTSTAATVL
GSNRLGNFTVENGKADGVVLESGGRLDVLEGHSAQKTRVDDGGTLAVSAGGKATGVTMTSGGALIADSGATVEGTNASGK
FSIDGTSGQASGLLLENGGSFTVNAGGLASNTTVGHRGTLTLAAGGSLSGRTQLSKGASMVLNGDVVSTGDIVNAGEIRF
DNQTTPDAALSRAVAKGDSPVTFHKLTTSNLTGQGGTINMRVRLDGSNTSDQLVINGGQATGKTWLAFTNVGNSNLGVAT
SGQGIRVVDAQNGATTKEGAFALSRPLQAGAFNYTLNRDSDEDWYLRSENAYRAEVPLYTSMLTQAMDYDRILAGSRSHQ
TGVNGENNSVRLSIQDGHLGHDNNGGIARGATPESSGSYGFVRLEGDLLRTEVAGMSLTTGVYGAAGHSSVDVKNDDGSR
AGTVRDDAGSLGGYLNLTHTSSGLWADIVAQGTRHSMKASSDNNDFRARGWGWLGSLETGLPFSITDNLMLEPQLHYTWQ
GLTLDDGQDNAGYVKFGHGSAQHVRAGFRLGSHNDMSFGEGTSSRDTLRDSTKHRVSELPVNWWVQPSVIRTFSSRGDMS
MGTAAAGSNMTFSPSRNGTSLDLQAGLEARVRENITLGVQAGYAHSVSGSSAEGYNGQATLNVTF
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