Name : tnpA
Accession : AAL08440.1
PAI name : SRL
PAI accession : AF326777
Strain : Shigella flexneri 2002017
Virulence or Resistance: Not determined
Product : transposase TnpA
Function : -
Note : similar to TnpA of Tn21 on plasmid R100
Homologs in the searched genomes : 144 hits ( 138 protein-level, 6 DNA-level )
Publication :
-Luck,S.N., Turner,S.A. and Rajakumar,K., "Direct Submission", Submitted (06-DEC-2000) Microbiology, Monash University, VIC 3800, Australia.
-Luck,S.N., Turner,S.A. and Rajakumar,K., "Direct Submission", Submitted (17-MAY-2002) Microbiology, Monash University, VIC 3800, Australia REMARK Amino acid sequence updated by submitter.
-Luck,S.N., Turner,S.A. and Rajakumar,K., "Direct Submission", Submitted (18-JUN-2002) Microbiology, Monash University, VIC 3800, Australia REMARK Sequence update by submitter.
-Luck,S.N., Turner,S.A. and Rajakumar,K., "Direct Submission", Submitted (19-JAN-2005) Microbiology, Monash University, VIC 3800, Australia REMARK Sequence update by submitter.
-Luck,S.N., Turner,S.A., Rajakumar,K., Sakellaris,H. and Adler,B., "Ferric dicitrate transport system (Fec) of Shigella flexneri 2a YSH6000 is encoded on a novel pathogenicity island carrying multiple antibiotic resistance genes", Infect. Immun. 69 (10), 6012-6021 (2001) PUBMED 11553538.
| DNA sequence : | |
ATGCCACGTCGTTCCATCCTGTCCGCCGCCGAGCGGGAAAGCCTGCTGGCGTTGCCGGACTCCAAGGACGACCTGATCCG
ACATTACACATTCAACGATACCGACCTCTCGATCATCCGACAGCGGCGCGGGCCAGCCAATCGGCTGGGCTTCGCGGTGC
AGCTCTGTTACCTGCGCTTTCCCGGCGTCATCCTGGGCGTCGATGAACTACCGTTCCCGCCCTTGTTGAAGCTGGTCGCC
GACCAGCTCAAGGTCGGCGTCGAAAGCTGGAACGAGTACGGCCAGCGGGAGCAGACCCGGCGCGAGCACCTGAGCGAGCT
GCAAACCGTGTTCGGTTTCCGGCCCTTCACCATGAGCCATTACCGGCAGGCCGTCCAGATGCTGACCGAGCTGGCGATGC
AAACCGACAAAGGCATCGTGCTGGCCAGCGCCTTGATCGGGCACCTGCGGCGGCAGTCGGTCATTCTGCCCGCCCTCAAC
GCCGTCGAGCGGGCGAGTGCCGAGGCGATCACCCGTGCTAACCGGCGCATCTACGACGCCTTGGCCGAACCACTGGCGGA
CGCGCATCGCCGCCGCCTCGACGATCTGCTCAAGCGCCGGGACAACGGCAAGACGACCTGGTTGGCTTGGTTGCGCCAGT
CTCCGGCCAAGCCAAATTCGCGGCATATGCTGGAACACATCGAACGCCTCAAGGCATGGCAGGCACTCGATCTGCCTACC
GGCATCGAGCGGCTGGTTCACCAGAACCGCCTGCTCAAGATTGCCCGCGAGGGCGGCCAGATGACACCCGCCGACCTGGC
CAAATTCGAGCCGCAACGGCGCTACGCCACTCTCGTGGCGCTGGCCACCGAGGGCATGGCCACCGTCACCGACGAAATCA
TCGACCTGCACGACCGCATCCTGGGTAAGCTGTTTAACGCTGCCAAGAATAAGCATCAGCAGCAGTTCCAGGCGTCAGGC
AAGGCCATCAACGCCAAGGTACGTCTGTACGGGCGCATCGGTCAGGCGCTGATCGACGCCAAGCAATCAGGCCGCGATGC
GTTTGCCGCCATCGAGGCCGTCATGTCCTGGGATTCCTTTGCCGAGAGCGTCACCGAGGCGCAGAAGCTCGCGCAACCCG
ATGACTTCGATTTCCTGCATCGCATCGGCGAGAGCTACGCCACCCTGCGCCGCTATGCACCGGAATTCCTTGCCGTGCTC
AAGCTGCGGGCCGCGCCCGCCGCCAAAAACGTGCTTGATGCCATTGAGGTGCTGCGCGGCATGAACACCGACAACGCCCG
CAAGCTGCCAGCCGATGCACCGACCGGCTTCATCAAGCCGCGCTGGCAGAAACTGGTGATGACCGACGCCGGCATCGACC
GGCGCTACTACGAACTGTGCGCGCTGTCCGAGTTGAAGAACTCCCTGCGCTCGGGCGACATCTGGGTGCAGGGTTCACGC
CAGTTCAAGGACTTCGAGGACTACCTGGTACCGCCCGAGAAGTTCACCAGCCTCAAGCAGTCCAGCGAATTGCCGCTGGC
CGTGGCCACCGACTGCGAACAATATCTGCATGAGCGGCTGACGCTGCTGGAAGCACAACTTGCCACCGTCAACCGCATGG
CGGCAGCCAACGACCTGCCGGATGCCATCATCACCGAGTCGGGCTTGAAGATCACGCCGCTGGATGCGGCGGTGCCCGAC
ACCGCGCAGGCGCTGATAGACCAGACAGCCATGGTCCTGCCGCACGTCAAGATCACCGAACTGCTGCTCGAAGTCGATGA
GTGGACGGGCTTCACCCGGCACTTCACGCACTTGAAATCGGGCGATCTGGCCAAGGACAAGAACCTGTTGTTGACCACGA
TCCTGGCCGACGCGATCAACCTGGGCCTGACCAAGATGGCCGAGTCCTGCCCCGGCACGACCTACGCGAAGCTCGCTTGG
CTGCAAGCCTGGCATACCCGCGACGAAACGTACTCGACAGCGTTGGCTGAACTGGTCAACGCTCAGTTTCGGCATCCCTT
TGCCGGGCACTGGGGCGATGGCACCACATCATCATCGGACGGACAGAATTTCCGAACCGCTAGCAAGGCAAAGAGCACGG
GGCACATCAACCCAAAATATGGCAGCAGCCCAGGACGGACTTTCTACACCCACATCTCCGACCAATACGCGCCATTCCAC
ACCAAGGTGGTCAATGTCGGCCTGCGCGACTCAACCTACGTGCTCGACGGCCTGCTGTACCACGAATCCGACCTGCGGAT
CGAGGAGCACTACACCGACACGGCGGGCTTCACCGATCACGTCTTCGCCCTGATGCACCTCTTGGGCTTCCGCTTCGCGC
CGCGCATCCGCGACCTGGGCGACACCAAGCTCTACATCCCGAAGGGCGATGCCGCCTATGACGCGCTCAAGCCGATGATC
GGCGGCACGCTCAACATCAAGCACGTCCGCGCCCATTGGGACGAAATCCTGCGGCTGGCCACCTCGATCAAGCAGGGCAC
AGGTGACGGCCTCGCTGATGCTCAGGAAACTAGCAGCTACCCGCGCCAGAACGGATTGTCCGTCGCGCTGCGCGAGTTGG
GCCGCATCGAGCGCACGCTGTTCATCCTAGACTGGCTACAAAGCGTCAAGCTACGCCGCCGCGTGCATGCCGGGCTGAAC
AAGGGCGAGGCGCGCAATGCGCTGGCCCGTGCCGTGTTCTTCAACCGCCTTGGTGAAATCCGTGACCGCAGTTTCGAGCA
GCAGCGCTACCGGGCCAGCGGCCTCAACCTGGTGACGACGGCCATCGTGCTGTGGAACACGGTCTACCTGGAGCGTACGG
CGCATGCGTTGCGCGGCAATGGTCATGCCGTCGATGACTCGCTATTGCAGTACCTGTCGCCACTCGGCTGGGAGCACATC
AANCTGACCGGTGATTACNTATGGCGCAGCAGCGCCAAGATCGGCGCGGGGAAGTTCAGGCCGCTACGGCNTCTGCAACC
GGCTTAG
|
| Protein sequence : | |
MPRRSILSAAERESLLALPDSKDDLIRHYTFNDTDLSIIRQRRGPANRLGFAVQLCYLRFPGVILGVDELPFPPLLKLVA
DQLKVGVESWNEYGQREQTRREHLSELQTVFGFRPFTMSHYRQAVQMLTELAMQTDKGIVLASALIGHLRRQSVILPALN
AVERASAEAITRANRRIYDALAEPLADAHRRRLDDLLKRRDNGKTTWLAWLRQSPAKPNSRHMLEHIERLKAWQALDLPT
GIERLVHQNRLLKIAREGGQMTPADLAKFEPQRRYATLVALATEGMATVTDEIIDLHDRILGKLFNAAKNKHQQQFQASG
KAINAKVRLYGRIGQALIDAKQSGRDAFAAIEAVMSWDSFAESVTEAQKLAQPDDFDFLHRIGESYATLRRYAPEFLAVL
KLRAAPAAKNVLDAIEVLRGMNTDNARKLPADAPTGFIKPRWQKLVMTDAGIDRRYYELCALSELKNSLRSGDIWVQGSR
QFKDFEDYLVPPEKFTSLKQSSELPLAVATDCEQYLHERLTLLEAQLATVNRMAAANDLPDAIITESGLKITPLDAAVPD
TAQALIDQTAMVLPHVKITELLLEVDEWTGFTRHFTHLKSGDLAKDKNLLLTTILADAINLGLTKMAESCPGTTYAKLAW
LQAWHTRDETYSTALAELVNAQFRHPFAGHWGDGTTSSSDGQNFRTASKAKSTGHINPKYGSSPGRTFYTHISDQYAPFH
TKVVNVGLRDSTYVLDGLLYHESDLRIEEHYTDTAGFTDHVFALMHLLGFRFAPRIRDLGDTKLYIPKGDAAYDALKPMI
GGTLNIKHVRAHWDEILRLATSIKQGTGDGLADAQETSSYPRQNGLSVALRELGRIERTLFILDWLQSVKLRRRVHAGLN
KGEARNALARAVFFNRLGEIRDRSFEQQRYRASGLNLVTTAIVLWNTVYLERTAHALRGNGHAVDDSLLQYLSPLGWEHI
XLTGDYXWRSSAKIGAGKFRPLRXLQPA
|
|
