Name : unnamed
Accession : AAL06379.1
PAI name : LEE
PAI accession : AF311901
Strain : Citrobacter rodentium ICC168
Virulence or Resistance: Virulence
Product : EscD
Function : -
Note : rCR9; similar to rOrf11/escD of EPEC E2348/69 and L0024 of EHEC EDL933 LEE; type III secretion
Homologs in the searched genomes : 12 hits ( 12 protein-level )
Publication :
-Deng,W., Li,Y., Vallance,B.A. and Finlay,B.B., "Locus of enterocyte effacement from Citrobacter rodentium: sequence analysis and evidence for horizontal transfer among attaching and effacing pathogens", Infect. Immun. 69 (10), 6323-6335 (2001) PUBMED 11553577.
-Deng,W., Li,Y., Vallance,B.A. and Finlay,B.B., "Direct Submission", Submitted (06-OCT-2000) Biotechnology Laboratory, University of British Columbia, Room 237, Wesbrook Building, 6174 University Boulevard, Vancouver, BC V6T 1Z3, Canada.
| DNA sequence : | |
ATGTTATCCTCATATAAAATCAAACTCCTTAATGGTGCGATGCGTAATCGGGAATTACAACTTCCGACAGGAAACCTAAC
GCTTGGTACGGAAGATAACGATATTGTTTATGTTCCCCTTGAACAAGGCCTCAATCAGTTTTTACTTGATATACGTGAGG
AAGGTGTTTTCCTTTTATCTCCAGTTGAATTTTGGATTGATGGGCAGCCCACTCCCTATGAAGCAGATAAACCATTACCA
ACCGGAAAGGTGATCGATATAGCGGGATGTTGCTTCATCATTGGTGATAATGACCATACCTTACCTTTGTCAGACGTACC
AGAACGGTTCTCTGCAAAAAATCAACGCAGAAAGCGTCTTATCCTGGCGAGCGTGATTGGCGCTGCTATTGCTTTGCCTG
GTGCTGTCGGCAGTTACATTTGGCTTTCCCCAAAAGTTGAGCTTCCAACGTTTACCAGAGCAGATGTATATAAGCAGCTA
AAAGAAAACAAACTCCATGCAATCACCCCGGTATGGCATGGGAAAAACGTCACACTTTATGGACGTTGCGAATCAACTAC
CGATTTAACACCTTTTTTTAATTACCTAAAAGAAAAAAATATTTTCTATTACAATAACATTATTTGCAACAACCAGATTA
TTTCTGCGATTAATGACATTTTAACAGAGTACGATTATAAAGATATTATTATAACAAAAGGTAATAAGCCGGGATTCTTC
CTGCTATCGGGATACATTCCTCCTTCACCAAAGTGGAGTGAAGTTGAAAACTTATTGCTAAATACGCCAGGCATTGCCGG
ATGGGAAATACACAACAACAGTAATAATAAGATCAGTGAATTGGTATCTGAGTTTAAAAAGAATAAATTAATAAATTATG
TCAATATTTTCAAAAAGAATGATGCCATTATTGTTGCCGGAGAAGTTTCTCAACAGAACGAGAGCAAGATTCTTGCCATC
ATAAACGCAATAAGCAAAAAGAGTAACGACAAGATACTCTTTCAAAACATTCAGCCATACATTTCAGCAGATATTTTCCC
TGGAAAAATACTCAGAATCAGTGGCACGATGAAGAATCCAACAATCGCTCTTGATAACGGTACAAGTCTGGGGATTGGTA
GTATTCTGAAAGGAGGCTATGTCATAGATGCGATTGATCCTAAAGATGGTATCAACATCTCCCGCCCAGACGAGTATATA
CATATACCGCTGTCGTATTAA
|
| Protein sequence : | |
MLSSYKIKLLNGAMRNRELQLPTGNLTLGTEDNDIVYVPLEQGLNQFLLDIREEGVFLLSPVEFWIDGQPTPYEADKPLP
TGKVIDIAGCCFIIGDNDHTLPLSDVPERFSAKNQRRKRLILASVIGAAIALPGAVGSYIWLSPKVELPTFTRADVYKQL
KENKLHAITPVWHGKNVTLYGRCESTTDLTPFFNYLKEKNIFYYNNIICNNQIISAINDILTEYDYKDIIITKGNKPGFF
LLSGYIPPSPKWSEVENLLLNTPGIAGWEIHNNSNNKISELVSEFKKNKLINYVNIFKKNDAIIVAGEVSQQNESKILAI
INAISKKSNDKILFQNIQPYISADIFPGKILRISGTMKNPTIALDNGTSLGIGSILKGGYVIDAIDPKDGINISRPDEYI
HIPLSY
|
|
