Name : unnamed
Accession : AAL06376.1
PAI name : LEE
PAI accession : AF311901
Strain : Citrobacter rodentium ICC168
Virulence or Resistance: Virulence
Product : translocated intimin receptor Tir
Function : -
Note : CR20; similar to Orf20/tir of EPEC E2348/69 and L0027 of EHEC EDL933 LEE
Homologs in the searched genomes : 12 hits ( 12 protein-level )
Publication :
-Deng,W., Li,Y., Vallance,B.A. and Finlay,B.B., "Locus of enterocyte effacement from Citrobacter rodentium: sequence analysis and evidence for horizontal transfer among attaching and effacing pathogens", Infect. Immun. 69 (10), 6323-6335 (2001) PUBMED 11553577.
-Deng,W., Li,Y., Vallance,B.A. and Finlay,B.B., "Direct Submission", Submitted (06-OCT-2000) Biotechnology Laboratory, University of British Columbia, Room 237, Wesbrook Building, 6174 University Boulevard, Vancouver, BC V6T 1Z3, Canada.
| DNA sequence : | |
ATGCCTATTGGTAATCTTGGTAATAATAATATAAGTAACAATTTAATTCCGCCTGCGCCGCCACTACCGTCACAAACAGA
CGGCGCGACAAGGGGGAATGGTAGTAGTCTTATTAGCTCTACAGGATCATTGGGATCTCGTTTATTATTTTCTCCCCTGA
GAAGTTCTATCGTTGATACTGTTGATTCCAGAGATGTTCCAGGGCTTCCTGAACATCCATTGCGTTTTGCGACATCAGAG
ACATGTTTGCATGGGGGATTTGAGGTTCTTCATGATAAGGGACCACTTGATACTCTAAATCAGAAAATTGGATCCTCTGT
ATTTCGTGTTGAACAGCAGCCAGATGGTACCCATGCTGCTATTGGGGTAAAAGATGGTGTAGAGGTTAGCGTTACATTAA
ATTCTAGTGAATTGCAAAGCTTGCAATCTCTTGACACTGAAGGTAACGGTCGATTTGTTTTCACCGGGGGACGTGGTGGT
AGTGGGCATGCCATGGTCACTGTTGCATCAGATATCTCGCAAGCTCGTGAGAAAATAATAGCTAAGTTAGATCCAGACAA
CCATGGAGGAAGACAACCTAAGGACATTGATACACGTTCTGTTGGTGTCGGAAGTGCTTCAGGAATGGGAGATGGAGTTG
TTAGCGAAACTCATACTTCAACAACAACTTCAAGTGTTCGTTCAGATCCTAAATTCTGGGTTTCTGTTGGCGCAATTGCT
GCTGGTTTAGCGGGGCTGGCAGCTACAGGTATTGTTCAGGCGGTTGCTTTGACACCAGCTCCGGATGATCCTACAACCAC
AGATCCTGATGAAGCCGCAAATGCTGCAGAAGCTGCGACAAAAGATCAGTTAACGAAGGAGGCGTTCCAGAATCCTGATA
ATCAGAAAGTTAACATTGATGAGCTCGGAAATGCAATTCCGTCGGGTGAGTTAAAAGATGATGTTGTTGCGCAAATAGCA
GATCAGGCTAAAGTGGCGGGTGAACAGGCCAGACAGCAAGCTGTTGAAAGCAATGCACAGGCGCAGCAGCGGCATGATGA
TCAGCAGGCTAAACGTCAGCAGGAATTGGATCTCTCATCAGGTATTGGTTACGGCCTCAGTAGTGCATTGATTGTTGGTG
GGGGGATTGGTGCTGGTGTTACGGCTATGCTCCATAGACGAAATCCGCCGACAGAACAGACAATAGCTACTACACATTCG
GTTATTCAGCAGCAGACCGGGGGAAATACTCGAGCACAAGGCGGCGCTGACACCACTGGAGTGGAAAACGCTTCTCTGAC
TAGACGTGATTCGCAGGCTAGTGTTGCATCGACCCAATGGTCAGATACCTCTGGCGATGTGGTGAATCCGTATGCTGAAG
GTTGGATGTCCAGGAATAATCCATCGCTTCTCGCTCCAGAAGAGCCTATTTATGATGAAGTCGCTCCGGATCCTAACTAT
AGCGTTATACAGCATTTTTCAGGGAATAATCCTGTGACTGGGCGGTTAGTAGGATCTCCTGGGCAGGGTATCCAAAGCAC
TTATGCGCTTCTCGCAAGCAGCGGTGGATTGCGATTAGGTATGGGAGGATTGACTGGGGGAGGTGAGAGCGCAGGGAGCG
CTGCGAATGCCGCTACAACACCGGGAGTTGAACGTTTCGTCTAA
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| Protein sequence : | |
MPIGNLGNNNISNNLIPPAPPLPSQTDGATRGNGSSLISSTGSLGSRLLFSPLRSSIVDTVDSRDVPGLPEHPLRFATSE
TCLHGGFEVLHDKGPLDTLNQKIGSSVFRVEQQPDGTHAAIGVKDGVEVSVTLNSSELQSLQSLDTEGNGRFVFTGGRGG
SGHAMVTVASDISQAREKIIAKLDPDNHGGRQPKDIDTRSVGVGSASGMGDGVVSETHTSTTTSSVRSDPKFWVSVGAIA
AGLAGLAATGIVQAVALTPAPDDPTTTDPDEAANAAEAATKDQLTKEAFQNPDNQKVNIDELGNAIPSGELKDDVVAQIA
DQAKVAGEQARQQAVESNAQAQQRHDDQQAKRQQELDLSSGIGYGLSSALIVGGGIGAGVTAMLHRRNPPTEQTIATTHS
VIQQQTGGNTRAQGGADTTGVENASLTRRDSQASVASTQWSDTSGDVVNPYAEGWMSRNNPSLLAPEEPIYDEVAPDPNY
SVIQHFSGNNPVTGRLVGSPGQGIQSTYALLASSGGLRLGMGGLTGGGESAGSAANAATTPGVERFV
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