Name : unnamed
Accession : AAL06362.1
PAI name : LEE
PAI accession : AF311901
Strain : Citrobacter rodentium ICC168
Virulence or Resistance: Virulence
Product : EscC
Function : -
Note : rCR3; similar to rOrf5/escC of EPEC E2348/69 and L0041 of EHEC EDL933 LEE; type III secretion
Homologs in the searched genomes : 82 hits ( 82 protein-level )
Publication :
-Deng,W., Li,Y., Vallance,B.A. and Finlay,B.B., "Locus of enterocyte effacement from Citrobacter rodentium: sequence analysis and evidence for horizontal transfer among attaching and effacing pathogens", Infect. Immun. 69 (10), 6323-6335 (2001) PUBMED 11553577.
-Deng,W., Li,Y., Vallance,B.A. and Finlay,B.B., "Direct Submission", Submitted (06-OCT-2000) Biotechnology Laboratory, University of British Columbia, Room 237, Wesbrook Building, 6174 University Boulevard, Vancouver, BC V6T 1Z3, Canada.
| DNA sequence : | |
ATGAAAAAAATAAGCCTTTTTATTTTTACAGCATTATTTTTTTGCAATACTCAGGCGGCCCCATCCTCTCTGGAAAAAAG
ATTAGGCGAGAGCGAGTATTTTATTATTACAAAAAGTTCTCCAGTAAGCGTGATCCTTAATGACTTTGCCGCTAACTACA
GCATTCCTGTTTTCATCAGTAATTCTGTGAATGATGATTTCTCTGGCGAAATAAAAAATGAAAAACCAGTAAAAGTATTG
GAGAAACTGTCCAAACTTTATCATCTCACATGGTATTATGATGAAAACATCTTGTATATTTATAAAACAAATGAAATATC
AAGAAGCATAATTACACCAACATATCTGGATATTGATTCACTGCTAAAATATTTGCGTGATACGATCTCTGTAAACAAAA
GTTCCTGTAATGTGAGAAAAATCACGACGTTTAACTCTATTGAAGTTCGGGGCGTTCCAGAATGTATAAAATATATTACA
TCTTTATCGGAAAGCCTTGACAAAGAAGCACAATCTAAAGCTAAAAATAAAGATGTCGTTAAAGTCTTTAAATTAAACTA
TGCTTCAGCGACAGATATAACATACAAATACCGCGACCAAAATGTTGTCGTGCCTGGCGTCGTCTCTATCCTAAAGACAA
TGGCAAGTAATGGTTCACTTCCCAGTACCGGTAAAGGTGCGGTTGAAAGAAGTGGTAATCTGTTCGATAATAGTGTAAAT
ATTTCTGCTGATCCACGTCTTAATGCTGTTGTTGTTAAAGACCGTGAAATAACCATGGATATATATCAGCAATTAATTTC
TGAGCTTGACATTGAACAAAGGCAAATTGAAATTTCCGTTTCAATTATTGATGTTGATGCAAACGATCTTCAACAGCTAG
GTGTAAACTGGTCCGGTACATTAAATGCAGGGCAAAGTTCTATTGCCTTTAATAGCTCTGCAGCACAGGCTAATATTAGT
TCCTCTGTGATAAGTAACGCTAGTAATTTCATGATTAGAGTGAATGCGTTACAGCAGAACTCGAAAGCCAAAATACTCTC
TCAGCCATCAATTATAACCTTAAATAATATGCAGGCGATTCTTGATAAAAACGTCACGTTTTATACAAAAGTTTCTGGTG
AAAAGGTGGCATCGCTGGAAAGTATAACCAGTGGGACATTGCTGAGAGTGACACCACGTATACTTGATGACACCTCGAAT
AGTCTTACCGGGAAACGTCGGGAACGAGTTCGTTTGTTACTTGATATTCAGGATGGCAACCAGTCGGTTAACCAAAGCAA
TATTCAGAATGCCGGCAGCCTCTTACCCGAAGTCCAAAATTCAGAAATGACAACAGAAGCAACATTAAGCGCAGGAGAAA
GTCTGCTACTTGGCGGGTTCATTCAGGATAAAGAAAGTTCAAGTAAAGATGGTATACCGTTGTTAAGCGATATTCCTGTT
ATTGGTAGCCTGTTCTCCAGTACGGTAAAACAAAAGCATAGTGTTGTTCGACTCTTTTTAATTAAAGCGACCCCGATAAG
ATCTGCATCTAGCGAATAA
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| Protein sequence : | |
MKKISLFIFTALFFCNTQAAPSSLEKRLGESEYFIITKSSPVSVILNDFAANYSIPVFISNSVNDDFSGEIKNEKPVKVL
EKLSKLYHLTWYYDENILYIYKTNEISRSIITPTYLDIDSLLKYLRDTISVNKSSCNVRKITTFNSIEVRGVPECIKYIT
SLSESLDKEAQSKAKNKDVVKVFKLNYASATDITYKYRDQNVVVPGVVSILKTMASNGSLPSTGKGAVERSGNLFDNSVN
ISADPRLNAVVVKDREITMDIYQQLISELDIEQRQIEISVSIIDVDANDLQQLGVNWSGTLNAGQSSIAFNSSAAQANIS
SSVISNASNFMIRVNALQQNSKAKILSQPSIITLNNMQAILDKNVTFYTKVSGEKVASLESITSGTLLRVTPRILDDTSN
SLTGKRRERVRLLLDIQDGNQSVNQSNIQNAGSLLPEVQNSEMTTEATLSAGESLLLGGFIQDKESSSKDGIPLLSDIPV
IGSLFSSTVKQKHSVVRLFLIKATPIRSASSE
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