Name : tcpF
Accession : AAK20794.1
PAI name : VPI
PAI accession : AF325734
Strain : Vibrio cholerae IEC224
Virulence or Resistance: Virulence
Product : toxin-coregulated pilus biosynthesis protein F
Function : -
Note : -
Homologs in the searched genomes : 7 hits ( 7 protein-level )
Publication :
-Karaolis,D.K., Lan,R., Kaper,J.B. and Reeves,P.R., "Comparison of Vibrio cholerae pathogenicity islands in sixth and seventh pandemic strains", Infect. Immun. 69 (3), 1947-1952 (2001) PUBMED 11179381.
-Karaolis,D.K.R., Lan,R., Kaper,J.B. and Reeves,P.R., "Direct Submission", Submitted (03-DEC-2000) Department of Microbiology, University of Sydney, Sydney, NSW 2006, Australia.
| DNA sequence : | |
ATGAGATATAAAAAAACCTTAATGTTATCAATCATGATTACATCATTTAACTCATTTGCATTTAATGATAATTATAGTTC
AACCAGTACGGTTTATGCTACGTCTAATGAAGCTACGGATTCAAGGGGGAGTGAGCACCTTAGATACCCTTATTTAGAGT
GTATCAAAATCGGTATGAGTAGAGATTATCTTGAAAACTGTGTGAAAGTATCTTTTCCAACCTCTCAAGATATGTTTTAT
GACGCATACCCATCGACAGAATCTGACGGTGCTAAGACAAGAACAAAAGAAGATTTCTCTGCTCGGCTTTTAGCTGGTGA
TTATGATAGTTTACAGAAATTGTATATAGATTTTTATCTTGCTCAAACGACTTTCGATTGGGAAATACCGACAAGGGATC
AAATTGAGACACTAGTTAATTATGCTAATGAAGGTAAATTGTCTACGGCACTTAATCAAGAGTATATTACAGGTCGATTT
CTTACAAAAGAAAATGGTCGATATGATATTGTGAATGTTGGTGGTGTTCCAGATAATACTCCAGTTAAACTACCAGCTAT
TGTTTCTAAACGCGGACTAATGGGTACAACTTCTGTAGTTAATGCAATTCCCAATGAAATTTATCCTCATATCAAAGTTT
ATGAAGGGACTCTTAGTCGTTTAAAACCTGGTGGTGCAATGATCGCAGTATTAGAATATGACGTAAGTGAATTAAGTAAG
CACGGGTATACCAATCTGTGGGATGTGCAGTTTAAGGTTCTTGTTGGAGTTCCACATGCAGAAACAGGAGTTATCTATGA
CCCTGTTTATGAAGAAACTGTCAAACCATATCAGCCTAGTGGCAACTTAACGGGTAAGAAGTTGTATAATGTATCTACAA
ATGACATGCATAATGGTTACAAGTGGTCAAATACTATGTTCTCAAATTCTAATTATAAAACGCAAATATTATTAACTAAA
GGAGATGGAAGTGGTGTGAAACTGTATAGCAAAGCATATTCAGAGAACTTTAAATAA
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| Protein sequence : | |
MRYKKTLMLSIMITSFNSFAFNDNYSSTSTVYATSNEATDSRGSEHLRYPYLECIKIGMSRDYLENCVKVSFPTSQDMFY
DAYPSTESDGAKTRTKEDFSARLLAGDYDSLQKLYIDFYLAQTTFDWEIPTRDQIETLVNYANEGKLSTALNQEYITGRF
LTKENGRYDIVNVGGVPDNTPVKLPAIVSKRGLMGTTSVVNAIPNEIYPHIKVYEGTLSRLKPGGAMIAVLEYDVSELSK
HGYTNLWDVQFKVLVGVPHAETGVIYDPVYEETVKPYQPSGNLTGKKLYNVSTNDMHNGYKWSNTMFSNSNYKTQILLTK
GDGSGVKLYSKAYSENFK
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