Name : tcpC
Accession : AAK20788.1
PAI name : VPI
PAI accession : AF325734
Strain : Vibrio cholerae IEC224
Virulence or Resistance: Virulence
Product : toxin-coregulated pilus biosynthesis outer membrane protein C (lipoprotein)
Function : -
Note : -
Homologs in the searched genomes : 8 hits ( 8 protein-level )
Publication :
-Karaolis,D.K., Lan,R., Kaper,J.B. and Reeves,P.R., "Comparison of Vibrio cholerae pathogenicity islands in sixth and seventh pandemic strains", Infect. Immun. 69 (3), 1947-1952 (2001) PUBMED 11179381.
-Karaolis,D.K.R., Lan,R., Kaper,J.B. and Reeves,P.R., "Direct Submission", Submitted (03-DEC-2000) Department of Microbiology, University of Sydney, Sydney, NSW 2006, Australia.
| DNA sequence : | |
ATGAAAAAAACAATAATCAGTACACTTGTTATCGGTTTGGTTTCCGGTTGTTCTAATACGAACTTGCTAAAAGACAATCT
GGCTAGCGAGCAAAGTGTTATCAATTTGAGTAAGTCTTCAAACGAAGCGAAATCTAGAAATATTGAATTTCTCTCTGGTG
CCTATTTAAGTGAGAGAAAAGTGCCAAAGCATGACATTAAGTTCAGTGGTAAGTATGTTGAGTTTGAAAGTAAATCACCG
ATAGAGTTAATCGATGTTCTTGATGGACTTTCTAAGCAATATAATATTCAGTATGTATTCTCAGATGAGTTAGAAGATGA
AAATTCAGAAGAAAATAAAAAGTCATCAGGCTCATCATCGGCGAAGAAAATAAAATACTCAGGTCCTCTGGCTGGTTTTT
TTGATTATTTAAGTAGTGCATATAACATGCACTTTGAATTTGGTCATAATAACTTAGTTAAGGCATATCATTATAAAAAT
CAAGTTTTTAACCTCCAGCAATACTTTGATGATAATAAGTTTAGCTCATCAATGCAGATCGGCGGTACCAGTGGCACATC
AAGTGGTTTAAAAGGTACTGCAGATACGGCTATAGAATCTAATAGTTGGGAAAAAATCGATGAGTTTTTAAGTGCATCGT
TAGGTGAAACTGGAAAATTTACTATTTTTGAAGATTATTCACTAGTTACAGTAAAAGCTCGACCAGATAAGTTTTTATTG
TTACATACTTTCTTTGATAAGTTAATCAATGAGAGCAAGATGCAAATCGCGGTTGATTATAGAGTGGTATCTCTTAGTGA
AGAACGCTTAAATCAGTTAGCTGCCAAATTTGGTATTGAAAATGCAGGGAAATACAGTATTACCAGTGATATGGTCGATG
CGATCTCTTTAAGTCAAGTAGGGGGGGGGTTAGGCGCTTCATATCGCTCCGCCTCAGCAAGATTAGATGCAGTGGTTAAT
GAGTTATCACAGGAAGTAATGCATGAGGGGCATTTTATCGGTATCCCTAACAGAGTAATGCCACTAAATGTCACTACAAA
CTCGAAGTATATATCCTCAATCGAAACAACAAAAGATACCAATACTGATGAGGAAACGAGAACTGTCAAAGTTTCTGACT
TAGTAACTGGTTTTAGCATGATGGTTATGCCGAAAATCTTAGATGATGGACGAATTCAAATATCGTCTGGCTTTTCAAGA
AAACAGTTAGTGTCTATTGGTACTGCACAAGGTATTACTCTACCAACAGTTGATGAAAATGAATCAATGAATACAGTAAC
GATGAACCCTGGTGAAGTACGCCTAGCAATGCTATTTAAGGATAACTACATTCAGAATAGTAATGGTGTTCAATTATTAG
GTGGTGGTACTGAAAATAAGAAATCGGCTCGTTATATTGCTGTGCTTGTTGGTGCAAGCAGTTACAAAACCAATGATCTG
GCTAGTAATAGAGTAAATATATATGACTAG
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| Protein sequence : | |
MKKTIISTLVIGLVSGCSNTNLLKDNLASEQSVINLSKSSNEAKSRNIEFLSGAYLSERKVPKHDIKFSGKYVEFESKSP
IELIDVLDGLSKQYNIQYVFSDELEDENSEENKKSSGSSSAKKIKYSGPLAGFFDYLSSAYNMHFEFGHNNLVKAYHYKN
QVFNLQQYFDDNKFSSSMQIGGTSGTSSGLKGTADTAIESNSWEKIDEFLSASLGETGKFTIFEDYSLVTVKARPDKFLL
LHTFFDKLINESKMQIAVDYRVVSLSEERLNQLAAKFGIENAGKYSITSDMVDAISLSQVGGGLGASYRSASARLDAVVN
ELSQEVMHEGHFIGIPNRVMPLNVTTNSKYISSIETTKDTNTDEETRTVKVSDLVTGFSMMVMPKILDDGRIQISSGFSR
KQLVSIGTAQGITLPTVDENESMNTVTMNPGEVRLAMLFKDNYIQNSNGVQLLGGGTENKKSARYIAVLVGASSYKTNDL
ASNRVNIYD
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