Name : unnamed
Accession : AAK20780.1
PAI name : VPI
PAI accession : AF325734
Strain : Vibrio cholerae IEC224
Virulence or Resistance: Not determined
Product : putative zinc metalloprotease
Function : -
Note : ORF4
Homologs in the searched genomes : 7 hits ( 7 protein-level )
Publication :
-Karaolis,D.K., Lan,R., Kaper,J.B. and Reeves,P.R., "Comparison of Vibrio cholerae pathogenicity islands in sixth and seventh pandemic strains", Infect. Immun. 69 (3), 1947-1952 (2001) PUBMED 11179381.
-Karaolis,D.K.R., Lan,R., Kaper,J.B. and Reeves,P.R., "Direct Submission", Submitted (03-DEC-2000) Department of Microbiology, University of Sydney, Sydney, NSW 2006, Australia.
| DNA sequence : | |
ATGAGAAAATCGATATTGATTAGCTTGTGCCTTTTTTCTAGCATTACAAATGCCTGTCCAATTGGTGATATTCTAGAGTC
TATGGAATTACCATTAGAAATTGAAACATCCCATGAGTTGCGCGCAGAATTGGCTAAGCTAACTGGTGGAACTTATTATA
GAGATTATTTATATCGATTGATTGATGAATTAAACCCATTTTTTAAAACTGACCAGATGCTAACAGCAGAGCATACCTAC
TGGGCAAAACAATTGCTTGATTCTGGAAAGCTTAAAAATTTTACAAGTGCACTTAGTTATGTGAAAATAAACAGAAACTC
TATGATACCAGAGTTTGAAGGTAGATATCTTGTTGCAAAAGAACTCTCAAAATTAGACCCAGCGCTTTTAAAATCAGGAT
GGAATACGGTTCATGAAATAAAGCTTGTAGTAACACATGATAATGTCACTACTTATTGGGAACATTTAAAAGGACAGCCT
GTTCGCGGACATGAAGCTGGCATAACGTGGGATTCTATTCCAGGAGCAGGATCACCAGAAGGTTTAACAGAATTAGTGAT
TGCTCTTCAAAAAAATCCGGATGGTAAATGGGCTATACCAACAGGTAATCATGGTTCGAAAAATCTAGTTATTCATGAGT
TTGGTCATACTCTAGATCGTGTAGTGGGTACATATTTTACTGGTAAGCCCTACAGTCAAAATCCGAGTTTTTATCAAGCT
TGGCATAGTGATTATCAACTAGGGAAGATAAAAGAACACTACTTCTTACAACCTGAGAATAACTATGCTGTTGCATTAGA
GGAGTCATTTGCTGAAGGGTTATCGAAACTTTATGGGATTGATAATATACAATCTACTTATGACTGGCCCTATATGTCCG
CTTATTTCTATGACCAGTTTAAAAAATCAATACAAGAACAAAATCAGGGTTATAAGTAA
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| Protein sequence : | |
MRKSILISLCLFSSITNACPIGDILESMELPLEIETSHELRAELAKLTGGTYYRDYLYRLIDELNPFFKTDQMLTAEHTY
WAKQLLDSGKLKNFTSALSYVKINRNSMIPEFEGRYLVAKELSKLDPALLKSGWNTVHEIKLVVTHDNVTTYWEHLKGQP
VRGHEAGITWDSIPGAGSPEGLTELVIALQKNPDGKWAIPTGNHGSKNLVIHEFGHTLDRVVGTYFTGKPYSQNPSFYQA
WHSDYQLGKIKEHYFLQPENNYAVALEESFAEGLSKLYGIDNIQSTYDWPYMSAYFYDQFKKSIQEQNQGYK
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