PAI Gene Information


Name : tcpF
Accession : AAK20764.1
PAI name : VPI
PAI accession : AF325733
Strain : Vibrio cholerae IEC224
Virulence or Resistance: Virulence
Product : toxin-coregulated pilus biosynthesis protein F
Function : -
Note : -
Homologs in the searched genomes :   7 hits    ( 7 protein-level )  
Publication :
    -Karaolis,D.K., Lan,R., Kaper,J.B. and Reeves,P.R., "Comparison of Vibrio cholerae pathogenicity islands in sixth and seventh pandemic strains", Infect. Immun. 69 (3), 1947-1952 (2001) PUBMED 11179381.

    -Karaolis,D.K.R., Lan,R., Kaper,J.B. and Reeves,P.R., "Direct Submission", Submitted (03-DEC-2000) Department of Microbiology, University of Sydney, Sydney, NSW 2006, Australia.


DNA sequence :
ATGAGATATAAAAAAACCTTAATGTTATCAATCATGATTACATCATTTAACTCATTTGCATTTAATGATAATTATAGTTC
AACCAGTACGGTTTATGCTACGTCTAATGAAGCTACGGATTCAAGGGGGAGTGAGCACCTTAGATACCCTTATTTAGAGT
GTATCAAAATCGGTATGAGTAGAGATTATCTTGAAAACTGTGTGAAAGTATCTTTTCCAACCTCTCAAGATATGTTTTAT
GACGCATACCCATCGACAGAATCTGACGGTGCTAAGACAAGAACAAAAGAAGATTTCTCTGCTCGGCTTTTAGCTGGTGA
TTATGATAGTTTACAGAAATTGTATATAGATTTTTATCTTGCTCAAACGACTTTCGATTGGGAAATACCGACAAGGGATC
AAATTGAGACACTAGTTAATTATGCTAATGAAGGTAAATTGTCTACGGCACTTAATCAAGAGTATATTACAGGTCGATTT
CTTACAAAAGAAAATGGTCGATATGATATTGTGAATGTTGGTGGTGTTCCAGATAATACTCCAGTTAAACTACCAGCTAT
TGTTTCTAAACGCGGACTAATGGGTACAACTTCTGTAGTTAATGCAATTCCCAATGAAATTTATCCTCATATCAAAGTTT
ATGAAGGGACTCTTAGTCGTTTAAAACCTGGTGGTGCAATGATCGCAGTATTAGAATATGACGTAAATGAATTAAGTAAG
CACGGGTATACCAATCTGTGGGATGTGCAGTTTAAGGTTCTTGTTGGAGTTCCACATGCAGAAACAGGAGTTATCTATGA
CCCTGTTTATGAAGAAACTGTCAAACCATATCAGCCTAGTAACAACTTAACGGGTAAGAAGTTGTATAATGTATCTACAA
ATGACATGCATAATGGTTACAAGTGGTCAAATACTATGTTCTCAAATTCTAATTATAAAACGCAAATATTATTAACTAAA
GGAGATGGAAGTGGTGTGAAACTGTATAGCAAAGCATATTCAGAGAACTTTAAATAA

Protein sequence :
MRYKKTLMLSIMITSFNSFAFNDNYSSTSTVYATSNEATDSRGSEHLRYPYLECIKIGMSRDYLENCVKVSFPTSQDMFY
DAYPSTESDGAKTRTKEDFSARLLAGDYDSLQKLYIDFYLAQTTFDWEIPTRDQIETLVNYANEGKLSTALNQEYITGRF
LTKENGRYDIVNVGGVPDNTPVKLPAIVSKRGLMGTTSVVNAIPNEIYPHIKVYEGTLSRLKPGGAMIAVLEYDVNELSK
HGYTNLWDVQFKVLVGVPHAETGVIYDPVYEETVKPYQPSNNLTGKKLYNVSTNDMHNGYKWSNTMFSNSNYKTQILLTK
GDGSGVKLYSKAYSENFK