Name : tagA
Accession : AAK20748.1
PAI name : VPI
PAI accession : AF325733
Strain : Vibrio cholerae IEC224
Virulence or Resistance: Virulence
Product : toxR-activated gene A protein
Function : -
Note : -
Homologs in the searched genomes : 6 hits ( 6 protein-level )
Publication :
-Karaolis,D.K., Lan,R., Kaper,J.B. and Reeves,P.R., "Comparison of Vibrio cholerae pathogenicity islands in sixth and seventh pandemic strains", Infect. Immun. 69 (3), 1947-1952 (2001) PUBMED 11179381.
-Karaolis,D.K.R., Lan,R., Kaper,J.B. and Reeves,P.R., "Direct Submission", Submitted (03-DEC-2000) Department of Microbiology, University of Sydney, Sydney, NSW 2006, Australia.
| DNA sequence : | |
GTGGTGGTAAGATATTCACTCTTAATGAAAGTTTCTTTTGCAATACTTATTTTCTTAGTTGGATGTAATGAGAATGCAAC
ATCCAGTAACGACCAGTATTTGACTGATCCTGATATAAGTGAACAAACAAAGAAGCCATCAAGGCCTATAATTGATGAAA
AAAATAAAGGTGTAACAGATACTTCGGTTACAATAGAATGGGATAAGATTGAGTGTGAAAAAAATTTTAGTCATTATAAT
GTAATTGTCTATAGAAAAGATCGAATAGAAGATGTAATAACTATCAGAACTAGGAATAATAGTGTTTTTATCGATGATTT
AAAACCTAACAGCCAGTATTCTATAGATGTCTCAAGTTGTTTACACTCTGCTTGTTCAGAAAGCGCAAAAATAGAATTCA
TTACGTTGAACGAGATAGATTATTATCACACCACAGAAATAGAAAAAAATGTGTATGGAAGCTTGGAAGGTGAAGTTAGA
TTTGTGCAAACGCATGTCATTTCTCCTGAGGGTAGAAAGAATGAGCCTGAAATAATCACAGGAAGAGATGCATTAATATT
GTTTAAGCCATCAATAAAAAACTCAAGTTCAATTTTGATGAAAATTTATTCAGAAGATGGACTCACTAGCAAAGTTGTAA
TGAAATCACCATCTATGTTGCCAAAAACTGATCAACCAATAGATATTGATGAAAATAATAAAGTTGTAAGTTACTCTAAC
TCATATTGGAGTGCAGAGATACCATGGAATAAAATGAAAAGTGGTATGTCATTACATTTTGAAGACGAAAACGGCAACTT
AGGTATTATTGAGTCAGAACGTATAAAATTTTCAGCACCTAGTGAATTGATTATTCAAAATATAGATCTTGGAATGTTAT
ATAAACCAAGAGGAAGAAATATCGTAATAAAAGAATTGGAAAGAACAGCCGTTGATTACTTTCAGAAAGTTCCTGTCTCA
AAGTTGATTTTTTCAGATTATACCCCTATTCATTTTGAAAAAATAACATTACCAAATGGTTCAGTATATACTGAGAAAAG
TGCTGATATAGGTGGATGGCATCAAGGTGATATGAGAGAAGCAGTAGGGAAAGCACTAGTATCTACCGGAATAAATAATG
CTAATTTAGGTATAGTTGCCTCGTCAGGATATTCTCAACAATACAACAGATTAACGAATCATATTACCGCACACACAAAT
ATTGGATATTATAACAATGGAGTGGTTGTGCATGGAGGGAGTGGTGGTGGTGGGATCGTTACACTAGAAAATACACTTCA
TAACGAATGGTCTCATGAATTGGGACATAACTATGGATTGGGACATTATGTTGCAGGTGGTACTAGTCATGGACCTGATA
CTTCATGGGGTTGGGATGGCTATTATAAAAGATTCATAGCTAACTTTGATTGGAAACGTTCACCACAATCAAATATAAGG
CCAGATAATCAAGAAGTTGTTAAGCCCTTCATGGACAAGTATACATATCTTTGGGATGCAATGTCTGGAGGATATGACCA
TCAAAATGGAATCATTAGTAGATATACACTTCATCATCCATATGTTGCAAGAATTATCCAAGATTGGCTTAAAAATGGGG
CTGTTGTAATAAATAATGATTATATGGTTTGGGATGAATTAAAAAATATCTATGTGTATAAGGGAACGAACTTCAAAGTT
CCAATAAAAAAAGGTGTACCTGTTGTGACGATATTAGGGGTTTATGATCCTGACAAAATTAATCCAAGTCAATTGTATCC
TCCGACATACAGCAATTATGGAAATATATTCGATTTAGAAAAACCTCGTTCAGAATCATCCTTAAAAGGGTGGCAATATG
TTAAAGATGTCAACTATCTAGATAGAGTTAATACACATTGGCATACGATGCTCGTAAATAGAAAAGAAGAAAAAATATGT
CGATTTTCTTATCTAAGCCCTAAAGGTAAAAAATTTGAATTTCTAGGGTATGAAGACATTGAGAATAAAATATGCACAGG
AAGTAGAAGTATTCACTATTTAGAAGACGGCAAGAAAAATCCAATAGAATCCAAGTATAATGATTATTTTTTATTATCAA
TAGATGGTGATGGAGAAATAAGTTATGTTCCTGATTCTACTATTGGTGAAAGTAAAATATGTTCACTAAAGATGTCTGGT
ACTGTATACGGTGCAGGTTTTATTAAAGGAAACTCTTGTCGGCAAATTGACGGTGTTTTTATGAACGGATTTCAATGGGC
TTTTACATTAAATCAATCAGGAGTAAATAGTACCTATACATGGTCAAATGAATGTGTATTAAAAATTAAAGATAAAGATA
ATAATATTGAATCAATATCGATACCAAATTATAGAATAGAAAAAAATCAGAGTAATAAAATTCATCTTAATATAAGCAGA
GAAAAGCCCATAATAGATATTAACGTGTATTGTGGAGAACATGAGTTAACTAGCATAAAGGTTTCTGATAATCCTGATAT
AAAATTACTAAAAGGACCTATTATTGTTGGGCAAGAGCATGGTTACACAAGCTATGAGCCTAAGCTTCCTAGTGGTTGGT
TCAAACATTATGACAATTTTGAACCCAAAAATGAAATCAACCATGAATTAGGAAAGATGCGTGTAAATGATAATGATGAA
TATATTTGTCGATTTAATTTTTCTGATTCAGATAGGGAAATGAAATTTGTTGGTTATGTGAGTCAATTATCTGAAAGTAA
GTACATTTGTACTGGTGGAAGTGAGATCTATTACAAGAAAAACGACATTAATATTGAACTATCATCAAAAGAAAACGATT
TTGAATGGTTATCAGTAAGAGATAAAAATTTGATAGGTTCAAAAATAGAATTTGATAACAATAAGACATTGTGCGTATTA
GATAATAGATCATTTTATGGTGCTGGTTACCTCGATGAAAACAATAGATGTACACAAGATAGACAAATTCATTGGTCTAA
TGGTAAACAATGGTTATTTAGTACTTATAAAACGATGACCTACCATTAA
|
| Protein sequence : | |
MVVRYSLLMKVSFAILIFLVGCNENATSSNDQYLTDPDISEQTKKPSRPIIDEKNKGVTDTSVTIEWDKIECEKNFSHYN
VIVYRKDRIEDVITIRTRNNSVFIDDLKPNSQYSIDVSSCLHSACSESAKIEFITLNEIDYYHTTEIEKNVYGSLEGEVR
FVQTHVISPEGRKNEPEIITGRDALILFKPSIKNSSSILMKIYSEDGLTSKVVMKSPSMLPKTDQPIDIDENNKVVSYSN
SYWSAEIPWNKMKSGMSLHFEDENGNLGIIESERIKFSAPSELIIQNIDLGMLYKPRGRNIVIKELERTAVDYFQKVPVS
KLIFSDYTPIHFEKITLPNGSVYTEKSADIGGWHQGDMREAVGKALVSTGINNANLGIVASSGYSQQYNRLTNHITAHTN
IGYYNNGVVVHGGSGGGGIVTLENTLHNEWSHELGHNYGLGHYVAGGTSHGPDTSWGWDGYYKRFIANFDWKRSPQSNIR
PDNQEVVKPFMDKYTYLWDAMSGGYDHQNGIISRYTLHHPYVARIIQDWLKNGAVVINNDYMVWDELKNIYVYKGTNFKV
PIKKGVPVVTILGVYDPDKINPSQLYPPTYSNYGNIFDLEKPRSESSLKGWQYVKDVNYLDRVNTHWHTMLVNRKEEKIC
RFSYLSPKGKKFEFLGYEDIENKICTGSRSIHYLEDGKKNPIESKYNDYFLLSIDGDGEISYVPDSTIGESKICSLKMSG
TVYGAGFIKGNSCRQIDGVFMNGFQWAFTLNQSGVNSTYTWSNECVLKIKDKDNNIESISIPNYRIEKNQSNKIHLNISR
EKPIIDINVYCGEHELTSIKVSDNPDIKLLKGPIIVGQEHGYTSYEPKLPSGWFKHYDNFEPKNEINHELGKMRVNDNDE
YICRFNFSDSDREMKFVGYVSQLSESKYICTGGSEIYYKKNDINIELSSKENDFEWLSVRDKNLIGSKIEFDNNKTLCVL
DNRSFYGAGYLDENNRCTQDRQIHWSNGKQWLFSTYKTMTYH
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