Name : unnamed
Accession : AAK20746.1
PAI name : VPI
PAI accession : AF325733
Strain : Vibrio cholerae IEC224
Virulence or Resistance: Not determined
Product : putative transposase
Function : -
Note : ORF1
Homologs in the searched genomes : 27 hits ( 27 protein-level )
Publication :
-Karaolis,D.K., Lan,R., Kaper,J.B. and Reeves,P.R., "Comparison of Vibrio cholerae pathogenicity islands in sixth and seventh pandemic strains", Infect. Immun. 69 (3), 1947-1952 (2001) PUBMED 11179381.
-Karaolis,D.K.R., Lan,R., Kaper,J.B. and Reeves,P.R., "Direct Submission", Submitted (03-DEC-2000) Department of Microbiology, University of Sydney, Sydney, NSW 2006, Australia.
| DNA sequence : | |
ATGGACAGAGAAATCCAACAAAGACTACAGTGGGTAAAAATGTATGAGGAATGTGGTGATGCAGGCCTCGTATGTCGACG
CTGTGGTATTTCCAGACCAACATTACGAAAGTGGGCTAAGCGATATAAGCAATGTGGAATCGCTGGTCTGGAAAGCCAGA
GCAGACGCCCTCATTCATCTCCAGATACCAAACTCACTGATGAGCTAAGAGCATTGATCCTTACGATGCGTGACAAACGC
AATTTAGGGGCGCGACGTTTACAAACGGAATTAATCCGACTTCACAAAATACACCTAAGCACAGCGACACTCCATAAAGT
TTTATCCGAAGCATCAGTCAAACCCATCGTAACTTACCGACGCAAAAAAGATTTCCAAAGATATGAGCGCCCAATTCCTG
GTGATAGAGTCCAGATGGACACGTGTAAAATAGCGCCTGGAATTTACCAGTATACAGCTATTGATGATTGCTCTCGCTAT
CGGGTTCTAAGGTGCTACTCTCGGCGCACAGCAGCAAATACAGTCGACTTTATCGATTGTGTCGTGGAAGAGATGCCATT
TCCTATCCAGCGTATTCAGACGGACAGAGGGCGTGAATTCTTTGCTGAAAAAGTCCAGAAACAACTCATGATTTATGGGA
TCAAGTTTCGCCCAAATAAGCCTGGCTCACCTCACTTGAATGGCAAAGTGGAACGTTCGCAGAAAACAGATAAAAGTGAG
TTCTATCCGACCATAGATGTCTCTGTGGGGCTGCAAGAACTGGATCTGCTACTAGCTGAATGGCAACACTACTACAACTG
GGAACGGCCCCACAGTTCGTTAAATGGGCTAACCCCGATAGACAGGATTACTGAGATATCTGATCAAACTCCTTTGTCTG
AAGAGGTATCTCAGAACTACCAGATCAAGAAAGAGCGGTTTCAAGAGCAAAATTACAAGCTCGATCTTCAGCTAAGAAAA
TTGAAACCATCTCTATGA
|
| Protein sequence : | |
MDREIQQRLQWVKMYEECGDAGLVCRRCGISRPTLRKWAKRYKQCGIAGLESQSRRPHSSPDTKLTDELRALILTMRDKR
NLGARRLQTELIRLHKIHLSTATLHKVLSEASVKPIVTYRRKKDFQRYERPIPGDRVQMDTCKIAPGIYQYTAIDDCSRY
RVLRCYSRRTAANTVDFIDCVVEEMPFPIQRIQTDRGREFFAEKVQKQLMIYGIKFRPNKPGSPHLNGKVERSQKTDKSE
FYPTIDVSVGLQELDLLLAEWQHYYNWERPHSSLNGLTPIDRITEISDQTPLSEEVSQNYQIKKERFQEQNYKLDLQLRK
LKPSL
|
|
