Name : tcpF
Accession : AAG31796.1
PAI name : VPI
PAI accession : AF306798
Strain : Vibrio cholerae IEC224
Virulence or Resistance: Virulence
Product : toxin co-regulated pilus biosynthesis protein F
Function : -
Note : type IV
Homologs in the searched genomes : 7 hits ( 7 protein-level )
Publication :
-Mukhopadhyay,A.K., Chakraborty,S., Shimada,T., Takeda,Y., Nair,G.B. and Berg,D.E., "Direct Submission", Submitted (20-SEP-2000) Molecular Microbiology, Washington University Medical School, 660 South Euclid Ave., Saint Louis, MO 63110, USA.
-Mukhopadhyay,A.K., Chakraborty,S., Takeda,Y., Nair,G.B. and Berg,D.E., "Characterization of VPI pathogenicity island and CTXphi prophage in environmental strains of Vibrio cholerae", J. Bacteriol. 183 (16), 4737-4746 (2001) PUBMED 11466276.
| DNA sequence : | |
ATGAGATATAAAAAAACTTTAATGATATCAATTATGATTACATCATTTAACACATTTGCATTTAATGATAACTATAGTTC
GACTAGTACAGTTTATGCTACGTCTAGTGAAGCTACGGATTCAAGGGGGAGTGAACACCTACGATATCCATACCTAGAAT
GTATTAAATTAGGTATGAGTAGAGATTATCTTGAAAATTGTGTCACAGTATCTTTCCCTACACTATCAGAGCTTTTTTAT
GGTGCATATCCTGCAGATGAAGAAGGAAAAAAAAGAACAAAAGAAGATTTTCAAGCTCGTTTATTATCAGGCGATTATGA
AGGGCTAGAGAAACTTTATGTAGATTATTATTTAGCACAAACAACTTATGATTGGCATATCCCAACAAGAGACCAAATCG
AATCTTTAGTTAATCTTGCTAAAGATGGTAAATTAACATCAACACTTAATAGTGAGTATCTTAAAGGTCGATTTCTCACA
AAAAATGATAGTGATTATAAGATTGTAAATGTCGGTAGTGTTGCTGATAGTGAGCCTGTTAAATTACCAGCAGTTGTTTC
TAAACGTGGGCTCATGGGTACTAGTGCAGTAGTGAATGCGATACCAAATGAAATTTTTCCTAATATCAAAATTTACAAAG
GAACCTCTGCTCTGTTACAACCTGGAATAGCATTTATGGCACCTATGGAATATGATACAAGCGAGTTACAAAAGCACGGC
TATAGTAATGTTTGGGATGTCAGTGCGACTGTTCTAGTGGGAATTCCAAGTGTAAATGGTGTTATTTATGATCCTATCTA
TAAAGAATCTCTAAAAGTATATCATCCTAGTGATAATTATCCTGGTAAAAAAATATTTAGTGTTTCAACTAACGATGTTC
ACAACGGATATCAATGGTCTAAAGCAATGTTTTCAAACTCTAAATATAGGACACAAGTTGTTCTTACTAAAGCAGATGGT
AGCGGTGTGAAATTGTATAGCAAAGCATTTTCAGAGAACTTTAATTAA
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| Protein sequence : | |
MRYKKTLMISIMITSFNTFAFNDNYSSTSTVYATSSEATDSRGSEHLRYPYLECIKLGMSRDYLENCVTVSFPTLSELFY
GAYPADEEGKKRTKEDFQARLLSGDYEGLEKLYVDYYLAQTTYDWHIPTRDQIESLVNLAKDGKLTSTLNSEYLKGRFLT
KNDSDYKIVNVGSVADSEPVKLPAVVSKRGLMGTSAVVNAIPNEIFPNIKIYKGTSALLQPGIAFMAPMEYDTSELQKHG
YSNVWDVSATVLVGIPSVNGVIYDPIYKESLKVYHPSDNYPGKKIFSVSTNDVHNGYQWSKAMFSNSKYRTQVVLTKADG
SGVKLYSKAFSENFN
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