Name : tcpF
Accession : AAG31794.1
PAI name : VPI
PAI accession : AF306797
Strain : Vibrio cholerae IEC224
Virulence or Resistance: Virulence
Product : toxin co-regulated pilus biosynthesis protein F
Function : -
Note : type III
Homologs in the searched genomes : No hits
Publication :
-Mukhopadhyay,A.K., Chakraborty,S., Shimada,T., Takeda,Y., Nair,G.B. and Berg,D.E., "Direct Submission", Submitted (20-SEP-2000) Molecular Microbiology, Washington University Medical School, 660 South Euclid Ave., Saint Louis, MO 63110, USA.
-Mukhopadhyay,A.K., Chakraborty,S., Takeda,Y., Nair,G.B. and Berg,D.E., "Characterization of VPI pathogenicity island and CTXphi prophage in environmental strains of Vibrio cholerae", J. Bacteriol. 183 (16), 4737-4746 (2001) PUBMED 11466276.
| DNA sequence : | |
ATGAAACTTAAATTAATTTCATCATCAATCATATTGTTATTAAGTAATTCTGCTTTAGCATTTAATGACAATTACTCGTC
TACATCAACGGTATACAGTTCGACTCAGAATGGAGATCAAGCTTCTGGTTCTTCTGGTACAAACTATCGTTATCCATTTG
CTGAGTGCTTGTCATTAGGTATGCCATCATCATCATTGAGCTCCTACTGTACGACCGTATCATTTCCAACGGATTCCAAG
GAGTTCTATGGTGTTTTTCCATCGATTGAAGGAGTAACTCGCACGCCAGAAGATTTTAATAAAATTTTAAACTCTGGTGC
TTATACTGAATTAGAGTCTAAATACATTAAACCTTATCTTGGACAACAAACTCCGGATTGGGCTATTCCTACTCCAGACC
AACTACAAACATTAGTTAATTTGTCAAAAAATGGTGATTTGTATAAAGAATCTAAAGATACCTACAATTCTGGCCGTTTC
TTAACCAAAACAGATAAAGGTGAATATGTCATTGCTAAGATTGGTAATGTAGCAGAGGATTCGCCATTAAAACTTCCAGA
TATCGTATCTAAAAATGGATTGCATGGCAGTAACCTCTCCGATGTAGAGCTACCGTCTAATGCTGTTGGAAAATTGACTA
CTAAATATACATACGTTACTACACAGGATTATTCAAGAAGGTTTGATGCTACATTTACTTTAATTCCTGATGAGTTCAAG
CGTGAAAATATTGATCCTACTAAAGTATATTTTGAAGTTTTATATGGTAAGCCCGGTAGTGATGGAATTATCCGAAATCC
ATTAAAAACAACGACACCATATTATATAGATCCTAGGTCCCCTAATTATTCTTATTTCATTAAATCCGATAGTCTGCATA
ACAAAGGTGATTCTTCAGATAATAAATATCAAATTAAGCTATATACTGATCCATCTAAAGTATCTTACCTAAAAGCACTA
CCTATTGAGTTTGATTGTCGATCTCAGTTTTGTGAGGGTGTAAGCGATTAA
|
| Protein sequence : | |
MKLKLISSSIILLLSNSALAFNDNYSSTSTVYSSTQNGDQASGSSGTNYRYPFAECLSLGMPSSSLSSYCTTVSFPTDSK
EFYGVFPSIEGVTRTPEDFNKILNSGAYTELESKYIKPYLGQQTPDWAIPTPDQLQTLVNLSKNGDLYKESKDTYNSGRF
LTKTDKGEYVIAKIGNVAEDSPLKLPDIVSKNGLHGSNLSDVELPSNAVGKLTTKYTYVTTQDYSRRFDATFTLIPDEFK
RENIDPTKVYFEVLYGKPGSDGIIRNPLKTTTPYYIDPRSPNYSYFIKSDSLHNKGDSSDNKYQIKLYTDPSKVSYLKAL
PIEFDCRSQFCEGVSD
|
|
