Name : tnpB
Accession : AAF80205.1
PAI name : cag PAI
PAI accession : AF282853
Strain : Helicobacter pylori 2017
Virulence or Resistance: Not determined
Product : TnpB
Function : -
Note : similar to IS1341 transposase encoded by GenBank Accession Number U60177
Homologs in the searched genomes : 60 hits ( 55 protein-level, 5 DNA-level )
Publication :
-Censini,S., Lange,C., Xiang,Z., Crabtree,J.E., Ghiara,P., Borodovsky,M., Rappuoli,R. and Covacci,A., "cag, a pathogenicity island of Helicobacter pylori, encodes type I-specific and disease-associated virulence factors", Proc. Natl. Acad. Sci. U.S.A. 93 (25), 14648-14653 (1996) PUBMED 8962108.
-Censini,S., Rappuoli,R. and Covacci,A., "Direct Submission", Submitted (17-MAR-2000) Molecular Biology, Chiron-Biocine, Via Fiorentina 1, Siena, SI 53100, Italy REMARK Sequence update by submitter.
-Censini,S., Rappuoli,R., Lange,C. and Covacci,A., "Direct Submission", Submitted (06-JUN-1996) Molecular Biology, Chiron-Biocine, Via Fiorentina 1, Siena, SI 53100, Italy.
-Covacci,A. and Rappuoli,R., "Tyrosine-phosphorylated bacterial proteins: Trojan horses for the host cell", J. Exp. Med. 191 (4), 587-592 (2000) PUBMED 10684850.
| DNA sequence : | |
TTGCTTAACGCTATCAAGTTTAGAATTTATCCTAACGCTCAACAAAAAGAGCTTATTTCTAAACATTTTGGCTGTTCTAG
GGTCGTGTATAACTACTTTTTAGATTACCGACAAAAGCAATACGCAAAAGGCATTAAAGAAACTTACTTCACCATGCAAA
AAGTCTTAACCCAAATCAAGCACCAAGAAAAATACCATTACCTCAATGAATGCAATTCTCAAAGCTTGCAAATGGCGTTA
AGACAGCTTGTGAGTGCTTATGATAATTTCTTTAGCAAAAGAGCGAGATACCCTAAATTCAAATCTAAAAAAAACGCTAA
ACAATCTTTTGCAATCCCCCAAAACATAGAAATCAAAACAGAGACTCAAACCATCGCTCTCCCTAAATTCAAAGAGGGCA
TTAAGGCTAAATTACACAGAGAATTGCCTAAAGATAGCGTTATCAAACAGGCTTTTATTTCTTGCATAGCCGATCAATAT
TTTTGTTCTATATCCTATGAAACCAAAGAGCCTATCCCTAAACCTACCATCATTAAAAAAGCGGTAGGTTTAGACATGGG
CTTAAGAACGCTCATTGTTACAAGCGATAAAATAGAATACCCACACATCCGTTTTTATCAAAAATTAGAAAAGAAACTCA
CTAAAGCGCAAAGGAGGTTAAGTAAAAAAGTAAAAGGCTCCAACAACAGGAAAAAACAAGCTAAAAAGGTAGCTAGATTG
CATCTAGCTTGTTCAAACACTAGAGATGACTACTTGCATAAAATCAGTAATGAGATAACCAATCAATACGATTTGATAGG
GGTAGAAACTTTGAATGTTAAGGGGCTTATGAGAACCTATCATTCTAAAAGCCTTGCTAATGCGAGTTGGGGGAAATTCC
TTACTATGCTAAAATACAAAGCCCAAAGAAAAGCTAAAACCCTATTAGGCATAGACAGATTTTTCCCTAGCTCTCAATTG
TGTTCTTATTGTGGGTTCAATACAGGCAAAAAACATGAAAACATCACTAAATTCACTTGTCCTCATTGCAATATCACACA
CCACAGAGATTACAATGCGAGCGTCAATATTAGAAACTACGCTTTAGGCATGCTAGATGACAGGCATAAAATAAAGATAG
ATAAAAGTAGGGTAGGGATTATCCGAACTGATTACGCTCATTACACTGATGAGCGCATCAAAGCTTGTGGAGCTTCCTCT
AATGGGGTTATTTCTAAATATGGCAACATATTGGATCTAGCTAGTTATGGAGCGATGAAGCAAGAAAAAGCCCAATCGCT
TTAG
|
| Protein sequence : | |
MLNAIKFRIYPNAQQKELISKHFGCSRVVYNYFLDYRQKQYAKGIKETYFTMQKVLTQIKHQEKYHYLNECNSQSLQMAL
RQLVSAYDNFFSKRARYPKFKSKKNAKQSFAIPQNIEIKTETQTIALPKFKEGIKAKLHRELPKDSVIKQAFISCIADQY
FCSISYETKEPIPKPTIIKKAVGLDMGLRTLIVTSDKIEYPHIRFYQKLEKKLTKAQRRLSKKVKGSNNRKKQAKKVARL
HLACSNTRDDYLHKISNEITNQYDLIGVETLNVKGLMRTYHSKSLANASWGKFLTMLKYKAQRKAKTLLGIDRFFPSSQL
CSYCGFNTGKKHENITKFTCPHCNITHHRDYNASVNIRNYALGMLDDRHKIKIDKSRVGIIRTDYAHYTDERIKACGASS
NGVISKYGNILDLASYGAMKQEKAQSL
|
|
