Name : unnamed
Accession : AAF71494.1
PAI name : Hrp PAI
PAI accession : AF232005
Strain : Pseudomonas syringae 1448A
Virulence or Resistance: Not determined
Product : unknown
Function : -
Note : ORF3; similar to Escherichia coli L0015
Homologs in the searched genomes : 435 hits ( 435 protein-level )
Publication :
-Alfano,J.R. and Collmer,A., "Direct Submission", Submitted (07-FEB-2000) Dept. Biol. Sci., UNLV, 1854 Maryland Parkway, Las Vegas, NV 89154, USA.
-Alfano,J.R., Charkowski,A.O., Deng,W.L., Badel,J.L., Petnicki-Ocwieja,T., van Dijk,K. and Collmer,A., "The Pseudomonas syringae Hrp pathogenicity island has a tripartite mosaic structure composed of a cluster of type III secretion genes bounded by exchangeable effector and conserved effector loci that contribute to parasitic fitness and pathogenicity in pl", Proc. Natl. Acad. Sci. U.S.A. 97 (9), 4856-4861 (2000) PUBMED 10781092.
| DNA sequence : | |
ATGCCCGACGACCTCCCTGACGATCCTGTTTTGCTTAAGCAGATGCTGCTTGAAGCCCAGGACGCCAAAGAAGCTTACGC
CACCCACATCGTTGATCTGAAAGAACAGATCAAGCTGTTGCGTGACCGTATCTTTGGTCGCAAGTCCGAACAGACGGTCG
AACCCAACACGCCGCAACTCGCGCTATTCAACGAACCTGAAAGCGAGCCGATGCTTCCCGTCGGCGACGCCGACGAAGAG
GTCGTTGCACCGGTCAAACGCCGTGGTAAACGCAAGCCACTGTCGGCTGATCTTCCCCGCATCGAAGTCATTCACGAATT
GCCCGAGCACGAACTGACCTGTGCCTGCGGTTGCCGCAAGCATGTCATCAGCGAAGAAACCAGTGAACAGCTGGATATCG
TGCCGATGCAGATTCGCGTGATCAAACATATCCGCAAAGTCTACGGTTGCCGCGGTTGTGAAACGGCACCGGTCACGGCT
GACAAGCCGGCTCAGTTGATCGAAAAGAGCATGGCCAGTCCGAGCGTACTGGCCATGCTGCTGACCACCAAATATGTCGA
CGGTTTGCCCCTGCATCGTTTCGAAACGGTACTAAGTCGACATGGTATCGAAATACCGCGCCAAACCTTGGCACGCTGGG
TAATCCAGTGCAGCGAGCACTTCCAGCCACTTTTGAATTTGATGCGTGATCGATTATTCGAAAGCCCGTTTATCCACTGC
GATGAAACCCGAGTCCAGGTACTAAAAGAGCCGGATCGTGACCCAACCAGCCAATCCTGGATGTGGGTACAGGCCAGCGG
ACCACCAGACCGAAAAGTCGTCCTGTTCGACTACACCACCAGCCGTGCGCAGGAAGTGCCGCTGCGCCTGCTGGAAAGTT
ATCGTGGCTACGTGATGACCGACGATTACGCAGGCTATAACGCTTTGGCGTTGCAACCGGGTGTAGAACGTCTGGCGTGC
ATGGCCCATGTACGACGCAAGTTCGTGGAGGCAAGGAAAGTGCAGCCCCAAGGCAAGACGGGCCGCGCCGATGCTGCACT
GGCATGCATTAACAAACTGTACGGCATCGAGCGTGAACTCAAGGATGTCAGCGATGAGCAGCGTTACATCGGTCGTCAGG
AAAAAAGCCTGCCTGAGCTGACGAAGCTGAAAGCATGGATGGAAAAAACGCAGCCGCAGGTCACGTCGCAAAGTGCCTTG
GGTAAAGCGGTGAGTTATCTGGCCAACAACTGGACCCGGCTGGAGCGTTATATCGAAGCTGGTTTTTTACCCATCGATAA
CAACGCTGCCGAAAGAGCAATCAGGCCGTTTGCCATAGGAAGAAAAGCATGGCTGTTCAGCGATACGCCCAAAGGCGCCA
CAGCCAGCGCCCAGATCTATAGCTTGGTCGAGACCGCCAAACTCAACGGCCAAGAGCCTTATACGTGGCTGCGCCACGTA
CTTGAGCGTTTGCCACATGCCTCGTCGGTAGAAGACTACGAAGCCCTATTGCCGTGGAACTGCTCGCCAGAGATGCCTCG
TTAA
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| Protein sequence : | |
MPDDLPDDPVLLKQMLLEAQDAKEAYATHIVDLKEQIKLLRDRIFGRKSEQTVEPNTPQLALFNEPESEPMLPVGDADEE
VVAPVKRRGKRKPLSADLPRIEVIHELPEHELTCACGCRKHVISEETSEQLDIVPMQIRVIKHIRKVYGCRGCETAPVTA
DKPAQLIEKSMASPSVLAMLLTTKYVDGLPLHRFETVLSRHGIEIPRQTLARWVIQCSEHFQPLLNLMRDRLFESPFIHC
DETRVQVLKEPDRDPTSQSWMWVQASGPPDRKVVLFDYTTSRAQEVPLRLLESYRGYVMTDDYAGYNALALQPGVERLAC
MAHVRRKFVEARKVQPQGKTGRADAALACINKLYGIERELKDVSDEQRYIGRQEKSLPELTKLKAWMEKTQPQVTSQSAL
GKAVSYLANNWTRLERYIEAGFLPIDNNAAERAIRPFAIGRKAWLFSDTPKGATASAQIYSLVETAKLNGQEPYTWLRHV
LERLPHASSVEDYEALLPWNCSPEMPR
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