PAI Gene Information


Name : unnamed
Accession : AAF71493.1
PAI name : Hrp PAI
PAI accession : AF232005
Strain : Pseudomonas syringae 1448A
Virulence or Resistance: Not determined
Product : unknown
Function : -
Note : ORF4; similar to Escherichia coli L0014
Homologs in the searched genomes :   658 hits    ( 657 protein-level,   1 DNA-level )  
Publication :
    -Alfano,J.R. and Collmer,A., "Direct Submission", Submitted (07-FEB-2000) Dept. Biol. Sci., UNLV, 1854 Maryland Parkway, Las Vegas, NV 89154, USA.

    -Alfano,J.R., Charkowski,A.O., Deng,W.L., Badel,J.L., Petnicki-Ocwieja,T., van Dijk,K. and Collmer,A., "The Pseudomonas syringae Hrp pathogenicity island has a tripartite mosaic structure composed of a cluster of type III secretion genes bounded by exchangeable effector and conserved effector loci that contribute to parasitic fitness and pathogenicity in pl", Proc. Natl. Acad. Sci. U.S.A. 97 (9), 4856-4861 (2000) PUBMED 10781092.


DNA sequence :
ATGCGACCCGACGCCAAAGTCGAAAAAGTGTACCTCTACCCCACGCCTGTGGACTTTCGAAAATCAATCGACGGGCTGGC
CGCACTGGTTGAGCTGGACATCAAAGTTGCCGTATTCGACCCCGTGCTTTTTGTTTTTCTGAATCGTCCTCGTAACCGGG
TGAAAATCCTTTACTGGGAGTGCAACGGCTTCTGCCTTTGGCTCAAGCGTCTGGAGTCCGAGCGTTTCAAAACGTCTCCC
GATGAGACAGACGAAGCCATCGTGCTGACAGTTCAGGAACTGAACTGGTTGCTCGACGGTTTTGATCTTTGGCGCAACCG
TCCTCACAAGGTTTTGACTCCACGATTTGTCGCCTGA

Protein sequence :
MRPDAKVEKVYLYPTPVDFRKSIDGLAALVELDIKVAVFDPVLFVFLNRPRNRVKILYWECNGFCLWLKRLESERFKTSP
DETDEAIVLTVQELNWLLDGFDLWRNRPHKVLTPRFVA