PAI Gene Information


Name : hrpK
Accession : AAF71482.2
PAI name : Hrp PAI
PAI accession : EF514224
Strain : Pseudomonas syringae 1448A
Virulence or Resistance: Virulence
Product : HrpK
Function : -
Note : putative type III translocator
Homologs in the searched genomes :   8 hits    ( 8 protein-level )  
Publication :
    -Alfano,J.R. and Collmer,A., "Direct Submission", Submitted (07-FEB-2000) Dept. Biol. Sci., UNLV, 1854 Maryland Parkway, Las Vegas, NV 89154, USA.

    -Alfano,J.R., Charkowski,A.O., Deng,W.L., Badel,J.L., Petnicki-Ocwieja,T., van Dijk,K. and Collmer,A., "The Pseudomonas syringae Hrp pathogenicity island has a tripartite mosaic structure composed of a cluster of type III secretion genes bounded by exchangeable effector and conserved effector loci that contribute to parasitic fitness and pathogenicity in pl", Proc. Natl. Acad. Sci. U.S.A. 97 (9), 4856-4861 (2000) PUBMED 10781092.

    -Huang,H.-C., "Direct Submission", Submitted (26-APR-1995) Hsiou-Chen Huang, Agricultural Biotechnology Laboratories, National Chung Hsing University, Taichung 40227, Taiwan.

    -Huang,H.C., Lin,R.H., Chang,C.J., Collmer,A. and Deng,W.L., "The complete hrp gene cluster of Pseudomonas syringae pv. syringae 61 includes two blocks of genes required for harpinPss secretion that are arranged colinearly with Yersinia ysc homologs", Mol. Plant Microbe Interact. 8 (5), 733-746 (1995) PUBMED 7579617.

    -Ramos,A.R., Morello,J.E., Ravindran,S., Deng,W.-L., Huang,H.-C. and Collmer,A., "Direct Submission", Submitted (21-MAR-2007) Plant Pathology, Cornell University, 334 Plant Science Building, Ithaca, NY 14853, USA.

    -Ramos,A.R., Morello,J.E., Ravindran,S., Deng,W.L., Huang,H.C. and Collmer,A., "Identification of Pseudomonas syringae pv. syringae 61 type III secretion system Hrp proteins that can travel the type III pathway and contribute to the translocation of effector proteins into plant cells", J. Bacteriol. 189 (15), 5773-5778 (2007) PUBMED 17526708.

    -Yu,C.-C. and Huang,H.-C., "The sequence analysis of conserved effector locus of the Pseudomonas syringae pv. syringae 61", Unpublished.

    -Yu,C.-C. and Huang,H.-C., "Direct Submission", Submitted (04-APR-2003) Graduate Institute of Biotechnology, National Chung-Hsing University, Taichung 40227, Taiwan.


DNA sequence : 
ATGCGTATATCCAGTTCTCCCAGTCCTGCCCTCGGCAGCATCGTGAATCAACCCACCTCTGGCGAACTGGCTGCTGAGAC
GCCATTGGCCAAAGCCTCGCTCACGCAGAGCGGCGCAGGTGGTGGTCAGGCTTTTGTACAGTTCGGCCAGGCCAACGACA
GCCCATCGTCCTTTTCGGGAACCGAGCAAAGCGGCTCATCGCTGATGAGTCTGCTGACTCGCAGCAGCAGTAGCGAAAGT
ACCTCAAGCGTCGATCAGGACAGTGATCAGGTGTCCCCGATGACGTCGGTCTCGTCAACCGCGAGCGCGTCACCCACGGC
GGCCTCCAACCCGGCGAATGCACCGAGCGCGACCGATGCAGCGTTTCTCGATAACTCCGAATACTCTTCGCCCGAGGCGC
TCAAGCGCTGGGAACCGATGGTTGCCAACCTGCCGCCCGAAGAGCGCGAGCAGGCCGCCAAAGAACTCAACCGGCCCATC
GCCGCAGCCTGGATGGCCAGAGAGAATGGCCCCAACGCCGAAAAGGCGATGGCGTTCATCAATGCCAATCCTGCGTTGAA
GACGGCGGTCGACGTCGGCAAGGACGGCGGTAATGCAGATGGCAAAATCACCAACAAAGACCTCAAGGCGTTCGCCAAAA
ACATGGAGAAGGCGGCCGACAATGCCGACAAAGACGTGGCCAAGTACATGGAAGACAACCCCGGCGCCGATCCTCAATCC
CTTGAAATGGTGCGCAGCGCAGCGGTGATGCGCGCCAATATGCCGTTGGCCACGGCTGCCGACCCTCATCATGCAGTCGG
GGCGGCGGACAAGACCGATGTCGATGGCAATGTCAGCGCCGAGGGTCTGAAAGCGCTGATTAAAAGTAACCCCGGGTTGT
CAGGTACGCTCAAACAGTCGTCCAACATGTGGTCGCAGGCGGGCTTCCTCAGCCAGGTGGATGAAGCCGGTCTGACCGGG
CGCAAGAAGGCTGCGCATAGTCCCGACCAGGTGTTCGATGCGTCCAATATGAGCGAGTGGATCAGAAAGAGCGCTCCCAA
AAATGGTGGCCAGTTCGCCAGCATGCTCAGCGACGCCGCGACGTTGAATTCGGTAGCCGGTATCGATATCAGCAAACTCA
ACGCCCAGGTTTTCGAGAAGCCCAAGGCTTACACCGGCGCGCAGAAGGCCGCTGTGATGATCAAGTTGCAGCAGACTCAG
CAGAGCGTGATAGCCGGGCGGGATTTGCGCAATACCGAGAAGACCGAGGCGGGCCTTAACGAGCGAATCGCTCAGTTGCA
AGCCGATCCCGACGTTCAGGAGTACCTCAACAAAAGCATTCCCGAACAGGAGCGCAGCCTGGTTCGCAGCGATTCGGCGC
TGCAGAAGGCCGTGACTGAGCAGGCTCAAAACGTCAACAGCGGGAAGGCCTTGCAAACCGACCTGGCAACCGCAGACAAG
GCCGTCGACAAACACAACCCCGACCCCGATTACAGCGGCGCCATCACCGGCCTGTCGGCTCAACTGCAACTGCAAAAAGA
CCTGTTTCCCGATGCCCAGGTGCCCACTGCCCAGCAAGTATTCAACAACCAGCCTGATGAAGTGCAAACGAAGATTGCCG
ATTCCTACGTTCGCAACTTCAGCGAGGGGGGCGCTCTGAAACAACTGCTTGGCCAGAAAAAGTCTGACGCCGGTGAGTCT
CTGCAAACCGCAGATAACCAGAAAGCGGCGTATGAAAGCGTGCTGCCCGCTGATTTCGTTAATGGTGAGCGTGAGAGCTA
CACGGCCAGCACCTTGTCCGAACTGCAGAACTCCAAAAAAGGCCGCAAGTTGCTGGAGGGCAAGACCGATGAAGAGGGCG
GCCCTTCGCTGGCCGAGCAGCTCGCCGAGCAAGGTATCGGAGGCAAGGCATTCAATTCGGTCATGGGCTTCGCGTCAGTG
TCTGACAGGCTCGCCAGCGGCGACAAGCTGGGCGCGGCTCAGAGCATCATCGACAGCTCCAGGTTGGGTGCGGAGGCAAT
CAAGGGCGGCATAGACACCGGCGCGAAAATGATGGGCCGCGAGGCGTCCGCCGGCCTTGGTCGTCTGGGCGGACAGATGA
TCGGCCGCGCTGTCGGCCTGGTTGCCGGCGAAGCCACAGGACTTGCCGCAGGCGCAGCGCTGGGCGCTGCAATCCCGGTG
ATCGGCTGGGCCATCGACGGCGCGATGGCTTTGGGTTTTGGTATTTCGGCGATTATCGACGCAGTCAAAAAGCACAAGGC
ACAGAAGGCGTTTGATCATAACGTTGACCCGGTGCTGGATCAGTTCGGGATTGACAGGGCGCATTGA

Protein sequence : 
MRISSSPSPALGSIVNQPTSGELAAETPLAKASLTQSGAGGGQAFVQFGQANDSPSSFSGTEQSGSSLMSLLTRSSSSES
TSSVDQDSDQVSPMTSVSSTASASPTAASNPANAPSATDAAFLDNSEYSSPEALKRWEPMVANLPPEEREQAAKELNRPI
AAAWMARENGPNAEKAMAFINANPALKTAVDVGKDGGNADGKITNKDLKAFAKNMEKAADNADKDVAKYMEDNPGADPQS
LEMVRSAAVMRANMPLATAADPHHAVGAADKTDVDGNVSAEGLKALIKSNPGLSGTLKQSSNMWSQAGFLSQVDEAGLTG
RKKAAHSPDQVFDASNMSEWIRKSAPKNGGQFASMLSDAATLNSVAGIDISKLNAQVFEKPKAYTGAQKAAVMIKLQQTQ
QSVIAGRDLRNTEKTEAGLNERIAQLQADPDVQEYLNKSIPEQERSLVRSDSALQKAVTEQAQNVNSGKALQTDLATADK
AVDKHNPDPDYSGAITGLSAQLQLQKDLFPDAQVPTAQQVFNNQPDEVQTKIADSYVRNFSEGGALKQLLGQKKSDAGES
LQTADNQKAAYESVLPADFVNGERESYTASTLSELQNSKKGRKLLEGKTDEEGGPSLAEQLAEQGIGGKAFNSVMGFASV
SDRLASGDKLGAAQSIIDSSRLGAEAIKGGIDTGAKMMGREASAGLGRLGGQMIGRAVGLVAGEATGLAAGAALGAAIPV
IGWAIDGAMALGFGISAIIDAVKKHKAQKAFDHNVDPVLDQFGIDRAH