Name : tnpC
Accession : AAD44736.1
PAI name : SHI-2
PAI accession : AF141323
Strain : Shigella flexneri 2002017
Virulence or Resistance: Not determined
Product : TnpC
Function : -
Note : similar to IS629 transposase
Homologs in the searched genomes : 350 hits ( 320 protein-level, 30 DNA-level )
Publication :
-Moss,J.E., Cardozo,T.J., Zychlinsky,A. and Groisman,E.A., "The selC-associated SHI-2 pathogenicity island of Shigella flexneri", Mol. Microbiol. 33 (1), 74-83 (1999) PUBMED 10411725.
-Moss,J.E., Groisman,E.A. and Zychlinsky,A., "Direct Submission", Submitted (07-APR-1999) Microbiology, NYU Medical Center, 540 First Avenue, New York, NY 10016, USA.
| DNA sequence : | |
ATGGCGGTTATGGGACTTGCCGGTGTTCTCCGGGGTAAAAAGGTCCGTACGACCATCAGCCGGAAAGCCGTTGCCGCAGG
CGACCGCGTAAACCGTCAGTTCGTGGCAGAACGACCTGACCAGCTGTGGGTGGCTGATTTTACTTACGTCAGCACATGGC
GGGGCTTCGTCTATGTGGCGTTCATCATTGATGTGTTTGCCGGATACATCGTGGGGTGGCGGGTCTCATCGTCCATGGAA
ACGACATTCGTGCTGGATGCACTGGAGCAGGCGTTATGGGCCCGTCGACCGTCCGGCACGGTCCATCACAGTGATAAAGG
TTCTCAGTATGTATCGCTGGCCTACACACAGCGGCTTAAGGAAGCCGGATTACTGGCATCAACAGGAAGTACAGGCGACT
CGTATGACAACGCGATGGCGGAGAGCATCAATGGTCTTTACAAAGCGGAGGTAATACACCGTAAGAGCTGGAAAAACCGT
GCAGAAGTGGAACTGGCCACACTAACGTGGGTGGACTGGTATAACAATCGACGATTGCTGGAAAGGCTGGGCCACATCCC
TCCGGCAGAAGCAGAAAAAGCTTATTATGCTTCCATCGGAAACGATGATCTGGCAGCCTGA
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| Protein sequence : | |
MAVMGLAGVLRGKKVRTTISRKAVAAGDRVNRQFVAERPDQLWVADFTYVSTWRGFVYVAFIIDVFAGYIVGWRVSSSME
TTFVLDALEQALWARRPSGTVHHSDKGSQYVSLAYTQRLKEAGLLASTGSTGDSYDNAMAESINGLYKAEVIHRKSWKNR
AEVELATLTWVDWYNNRRLLERLGHIPPAEAEKAYYASIGNDDLAA
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