Name : tnpA
Accession : AAD44733.1
PAI name : SHI-2
PAI accession : AF141323
Strain : Shigella flexneri 2002017
Virulence or Resistance: Not determined
Product : TnpA
Function : -
Note : similar to IS3 transposase
Homologs in the searched genomes : 94 hits ( 83 protein-level, 11 DNA-level )
Publication :
-Moss,J.E., Cardozo,T.J., Zychlinsky,A. and Groisman,E.A., "The selC-associated SHI-2 pathogenicity island of Shigella flexneri", Mol. Microbiol. 33 (1), 74-83 (1999) PUBMED 10411725.
-Moss,J.E., Groisman,E.A. and Zychlinsky,A., "Direct Submission", Submitted (07-APR-1999) Microbiology, NYU Medical Center, 540 First Avenue, New York, NY 10016, USA.
| DNA sequence : | |
ATGCCGCTGTCCATAAGGCATTCTTTGAGGCAAAGCAGCGATACGGTGCTCCCCGCCTTGCTGACGAACTGCCGGAGTTC
AATATTAAAACCATTGCCGCCAGCCTGCGTCGTCAGGGGCTGCGGGCGAAAGCCAGCCGGAAGTTCAGCCCGGTCAGCTA
CCGTGCACATGGCCTGCCCGTATTGGAGAATCTGCTGGAGCAGGACTTCAGCGCCAGTGGCCCGAAACCAGAAGTGGGCG
GGTGACATCACGTACTTGCGTACCGATGAGGGCTGGTTGTATCTCGCAGTAGTCATCGACCTGTGGTCACGCGCCGTCAT
TGGCTGGTCGATGTCACCGCGAATGACAGCACAACTGGCCTGTGATGCACTGCAAATGGCGTTGTGGCGGAGAAGACGCC
CGGAAAGCGTCATTGTTCATACGGACCGTGGTGGTCAGTACTGTTCAGGGGATTATCAGGCAATGCTGAAGCGACACAAC
CTGCGTGGCAGTATGAGTGCGAAAGGCTACTGTTATGACAATGCCTGTGTGGAAAGCTTCTTTCATTCGCTGAAGGTGGA
ATGTATCCACGGGGAACGCTTTAGCAGCCGGGAAATAATGCGGGCAACGGTGTTTAATTATATCGAGTGTGATTACAATC
GCTGGCGTCGTCACAGTGCCTGTGGCGGTCTCAGCCCGGAACAATTTGAAAACCATAATCTCGCTTAG
|
| Protein sequence : | |
MPLSIRHSLRQSSDTVLPALLTNCRSSILKPLPPACVVRGCGRKPAGSSARSATVHMACPYWRICWSRTSAPVARNQKWA
GDITYLRTDEGWLYLAVVIDLWSRAVIGWSMSPRMTAQLACDALQMALWRRRRPESVIVHTDRGGQYCSGDYQAMLKRHN
LRGSMSAKGYCYDNACVESFFHSLKVECIHGERFSSREIMRATVFNYIECDYNRWRRHSACGGLSPEQFENHNLA
|
|
