Name : afaC
Accession : AAD44022.2
PAI name : PAI-I AL862
PAI accession : AF072900
Strain : Escherichia coli 042
Virulence or Resistance: Virulence
Product : AfaC
Function : -
Note : usher
Homologs in the searched genomes : 74 hits ( 74 protein-level )
Publication :
-Lalioui,L. and Le Bouguenec,C., "afa-8 Gene cluster is carried by a pathogenicity island inserted into the tRNA(Phe) of human and bovine pathogenic Escherichia coli isolates", Infect. Immun. 69 (2), 937-948 (2001) PUBMED 11159989.
-Lalioui,L. and Le Bouguenec,C., "Direct Submission", Submitted (19-JUN-1998) Path. Bact. des Muq., Institut Pasteur, 28 rue du Dr. Roux, Paris Cedex 15 75724, France.
-Lalioui,L. and Le Bouguenec,C., "Direct Submission", Submitted (01-JUL-1998) Path. Bact. des Muq., Institut Pasteur, 28 rue du Dr Roux, Paris cedex 15 75724, France.
-Lalioui,L. and Le Bouguenec,C., "Direct Submission", Submitted (03-AUG-1999) Path. Bact. des Muq., Institut Pasteur, 28 rue du Dr. Roux, Paris Cedex 15 75724, France REMARK Sequence update by submitter.
-Lalioui,L. and Le Bouguenec,C.C., "Direct Submission", Submitted (02-AUG-2000) Unite de Pathogenie Bacterienne des Muqueuses, Institut Pasteur, 28 rue du Dr Roux, Paris Cedex 15 75724, France REMARK Sequence update by submitter.
-Lalioui,L., Jouve,M., Gounon,P. and Le Bouguenec,C., "Molecular cloning and characterization of the afa-7 and afa-8 gene clusters encoding afimbrial adhesins in Escherichia coli strains associated with diarrhea or septicemia in calves", Infect. Immun. 67 (10), 5048-5059 (1999) PUBMED 10496877.
| DNA sequence : | |
ATGCACAGGAATAAGTCATCTTCAGGTTTATCTTTATATTGCGTAAAAACAAAAATTACAGCGGTTGCTCTCTCTGTGAT
GGCGGCCTGTACCCTTCTTTACACCGGGAATACTGAGGCCCGCACATACTCCTTTGATGCTTCCATGCTTAAAGGTGGCG
GAAAGGGGGTGGACCTGACGTTGTTTGAAGAAGGTGCCCAACTGCCCGGTATCTATCCGGTTGATATTATCCTGAACGGT
TCGCGGGTGGATTCGCGGGACATGGCGTTCCGTACGGAGAAAGATGCGGAGGGTAAGACTTATTTGAAAACCTGTCTGAC
CCGGGAAATGCTGGCCCGCTATGGTGTCATGACGGAGGAATATCCGGAGTTGTTTCACGGGGATGACGGAAAGGAAGCTG
AAGCCTGTGCTGAGTTATCCGTTATTCCACAGGCCACGGAAACATACCAGTTTGCGTCACAGCAGTTGCTGCTGAGTATT
CCTCAGGTGGCCCTGCGCCCGCCCCTGAGGGGGATAGCGCCGGAGGCCTTATGGGATGATGGTATTCCTGCTTTTCTGCT
GAACTGGCAGGCAAATACCAGTCGTTCAGAATATCGTGGATACGGGAAATCGGTTACTGACAATTACTGGGTCACTCTTG
AGCCGGGCATTAATCTTGGTCCCTGGCGGGTGCGTAACCTGACAACCTGGAACAGGTCATCCGGTCAGCCGGGGCAGTGG
GAGAGTGCCTATATTCGTGCGGAGCGGGGGATTAACAGTCTCAGAAGTCGTCTGACGCTGGGTGAGGATTACACGCCTTC
AGACATTTTTGACAGTGTGCCGTTCCGTGGGGTGATGCTGGGGGCAGATGAGAGCATGGTGCCTTATAACCAGCGTGAAT
TTGCGCCGGTGGTCAGAGGTATTGCCCGGACCCAGGCCAGGATTGAGGTGCGCCAGAATGGTTATCTGATTGACAGCCGG
ACGGTGGCCCCGGGCGCATTTGCCCTGACGGACCTGCCGCTGACGGGGTCAGGTGGAGACCTTCAGGTAACGGTACAGGA
ATCTGATGGTACTGCTCAGGTGTTTACGGTGCCTTACACCACACCGGCCATTGCGCTTCGTGAGGGATATATGAAGTACA
GCATTGCCGGGGGGGAGTACCGTTCTTCAGATGATGCTGTTGAGCATTCACCGCTGGGGCAGATGAGTGTCATGTATGGT
CTGCCATGGGGGCTGACGGCCTTCGGGGGAGCACAGATGTCATCGCATTATCAGTCAGCGGCTCTGGGGCTGGGATGGTC
AATGGGCAGACTGGGGGCGGTGTCGGTTGACGGCATTCATTCCCGCGGTCAGCAGAAGGGACGGGATACGGAGACGGGAG
AGACATGGCGTCTGCGTTACAACAAGTCATTTGAACTTACGAATACAGATTTGACAGCGGCGAGATATCAGTATACGTCC
TCAGGATTCCACACATTGTCCGATGTGCTGAGTACATTTAGAAATGATAATTTTCGTGCATATAGTTATAGTGGGGACAG
GAGTCGCCGGACAACATTACGCCTTAATCAGTCTGTGGGATCTCTGGGGTATATGAGCTTTTACGGTAGCCGTGATGAGT
TCCGTCATAACCGACAGAAGCAGGATTCTTTCGGCATGTCATATGGAACGTCATGGAAGAATATTTCGTGGTACGTTAAT
TGGTCCGGTAACTATAGTACAAATGCATATTATCAGAGAGGGCATATAGAGGATAGTATCAATCTGTGGATGAATATTCC
TCTGGGGCAGTGGATTGGGGGTAGAGATAACGATATTAATGTTACAACTCAAACGCAAAGAACTACGGGGCAGAATACTT
GGTACGAAACCGGTTTGAATGGTCGCGCATTTGACCGTAGGTTGTATTGGGATGTGAGTGAGCGGATAGCTCCCGGAAGT
GAAAATAATGTAGACAGTAGCCGACTGAATTTGAGGTGGTTTGGTACCTATGGTGAGTTGGCGGGGATGTACAGTTACAG
CAGTTATATTCGCCAGATGAGTGCTGGTATATCAGGAGGTATGGTGCTCCACAATGAAGGTATCACTCTTGGTCAGAAAG
GAGAGGATACGGTTGCTCTGGTTGTAGCACCTGGAGTTAATGGCGCTTCAGTTGGGAGTTTGCCTGGCGTTAGGACCGAT
ACCAGAGGTTACACTCTTGTGAATCATGTATCTCCATACCAAGAAAATCTTATTACACTGGATCCGACAACTTTCCCGGA
AAATGTGGAAGTATCACAGACAGATACTCGTGTTGTTCCTACAAAGGGAGCCGTGGTTCGGGCGAAGTTTATCACTCGAG
TAGGGGGAAGAGCACTGATAACTCTGTCACGTAGTGGCTCTCGCCTGCCTTTTGGAGCTGTGGTGACAGAGGAAGGAAAG
AAAGGTCAAATGCCTGGTGGGGCAGGGGTTGTGGGGGATAATGGAGAAGTGTATTTGAGCGGACTGGATGAAACCGGACA
GTTGAAGGTTCAATGGGGGCGTAACAGTTCTTGCCGTGCAAATTATCGACTTCCAGAGGAGAAAGAAGCAACTGGTATTT
TTCTGGTGCGCACTGTGTGTATGTGA
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| Protein sequence : | |
MHRNKSSSGLSLYCVKTKITAVALSVMAACTLLYTGNTEARTYSFDASMLKGGGKGVDLTLFEEGAQLPGIYPVDIILNG
SRVDSRDMAFRTEKDAEGKTYLKTCLTREMLARYGVMTEEYPELFHGDDGKEAEACAELSVIPQATETYQFASQQLLLSI
PQVALRPPLRGIAPEALWDDGIPAFLLNWQANTSRSEYRGYGKSVTDNYWVTLEPGINLGPWRVRNLTTWNRSSGQPGQW
ESAYIRAERGINSLRSRLTLGEDYTPSDIFDSVPFRGVMLGADESMVPYNQREFAPVVRGIARTQARIEVRQNGYLIDSR
TVAPGAFALTDLPLTGSGGDLQVTVQESDGTAQVFTVPYTTPAIALREGYMKYSIAGGEYRSSDDAVEHSPLGQMSVMYG
LPWGLTAFGGAQMSSHYQSAALGLGWSMGRLGAVSVDGIHSRGQQKGRDTETGETWRLRYNKSFELTNTDLTAARYQYTS
SGFHTLSDVLSTFRNDNFRAYSYSGDRSRRTTLRLNQSVGSLGYMSFYGSRDEFRHNRQKQDSFGMSYGTSWKNISWYVN
WSGNYSTNAYYQRGHIEDSINLWMNIPLGQWIGGRDNDINVTTQTQRTTGQNTWYETGLNGRAFDRRLYWDVSERIAPGS
ENNVDSSRLNLRWFGTYGELAGMYSYSSYIRQMSAGISGGMVLHNEGITLGQKGEDTVALVVAPGVNGASVGSLPGVRTD
TRGYTLVNHVSPYQENLITLDPTTFPENVEVSQTDTRVVPTKGAVVRAKFITRVGGRALITLSRSGSRLPFGAVVTEEGK
KGQMPGGAGVVGDNGEVYLSGLDETGQLKVQWGRNSSCRANYRLPEEKEATGIFLVRTVCM
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