Name : intB
Accession : AAD37509.1
PAI name : PAI IV 536
PAI accession : AF135406
Strain : Escherichia coli 042
Virulence or Resistance: Not determined
Product : P4-like integrase
Function : -
Note : similar to Yersinia pseudotuberculosis int gene in GenBank Accession Number AJ009592
Homologs in the searched genomes : 333 hits ( 326 protein-level, 7 DNA-level )
Publication :
-Schubert,S., Rakin,A., Fischer,D., Sorsa,J. and Heesemann,J., "Characterization of the integration site of Yersinia high-pathogenicity island in Escherichia coli", FEMS Microbiol. Lett. 179 (2), 409-414 (1999) PUBMED 10518744.
-Schubert,S., Rakin,A., Fischer,D., Sorsa,J. and Heesemann,J., "Direct Submission", Submitted (17-MAR-1999) Dept. of Bacteriology, Max von Pettenkofer-Institut, Pettenkoferstr. 9a, Munich 80336, Germany.
| DNA sequence : | |
ATGCTGGCGCTGAATATCAACCCGGTACAGCAGCGGGCTGCTGAACGTGGCTCACGAACACCGGAGAAAGTTTTTAAAAA
CGTGGCGCTGGCGTGGCATAAAAGTAACAGGAAATGGTCGCAGAACACCGCCGACCGTCTGCGTGCCAGTCTGAACAATC
ACATCTTTCCGGTCATCGGGAACTTACCTGTATCAGAACTTAAACCCCGTCATTTCATTGACCTGCTGAAAGGGATCGAG
GAAAAAGGTCTGCTGGAGGTTGCGTCCCGCACACGGCAGCACCTGAGTAACATAATGCGCCATGCGGTCCATCAGGAGTT
AATCGATACGAACCCTGCAGCAAACCTTGGCGGCGTGACCACACCTCCTGTCAGACGGCACTATCCTGCCCCGCCGCTGG
AGCGGCTGCCTGAACTGCTTGAACGTATTGGGGCATATCATCAGGGCCGTGAACTGACCCGGCATGCCGTTCTGCTGATG
CTGCATGTGTTCATTCGCTCCAGTGAACTGCGTTTCGCCCGCTGGTCAGAGATTGATTTCACAAACCGAGTCTGGACGAT
ACCCGCGACGCGAGAACCCATTATTGGCGTGCGTTATTCCGGCCGCGGGGCAAAAATGCGAATGCCGCATATCGTCCCCC
TCTCAGAACAGTCCATCGCCATTCTGAAACAGATTAAGGATATCACCGGTAATAATGAACTGATCTTCCCCGGCGACCAT
AACCCGTATAAGCCAATGTGTGAAAACACGGTCAATAAGGCACTGCGGGTGATGGGTTACGACACGAAAAAGGATATCTG
CGGTCACGGCTTCCGGGCAATGGCATGCAGTGCGCTGATGGAATCGGGTTTATGGGCAAAGGACGCAGTAGAACGCCAGA
TGAGTCATCAGGAGCGCAATACCGTGCGCATGGCTTATATTCATAAGGCAGAGCACCTGGAAGCCCGCAAAGCGATGATG
CAGTGGTGGTCGGATTATCTGGAAGCATGCCGAGAATCTTATGCACCGCCTTATACAATTGGTAAAAATAAGTTTATCCC
ATAG
|
| Protein sequence : | |
MLALNINPVQQRAAERGSRTPEKVFKNVALAWHKSNRKWSQNTADRLRASLNNHIFPVIGNLPVSELKPRHFIDLLKGIE
EKGLLEVASRTRQHLSNIMRHAVHQELIDTNPAANLGGVTTPPVRRHYPAPPLERLPELLERIGAYHQGRELTRHAVLLM
LHVFIRSSELRFARWSEIDFTNRVWTIPATREPIIGVRYSGRGAKMRMPHIVPLSEQSIAILKQIKDITGNNELIFPGDH
NPYKPMCENTVNKALRVMGYDTKKDICGHGFRAMACSALMESGLWAKDAVERQMSHQERNTVRMAYIHKAEHLEARKAMM
QWWSDYLEACRESYAPPYTIGKNKFIP
|
|
