Name : spi4_R
Accession : AAC26655.1
PAI name : SPI-4
PAI accession : AF060869
Strain : Salmonella enterica RSK2980
Virulence or Resistance: Virulence
Product : ltkB homolog
Function : -
Note : member of ABC transporter family; 5 transmembrane helices (N-terminus outside); contains ATP/GTP-binding site motif A (P-loop)
Homologs in the searched genomes : 42 hits ( 42 protein-level )
Publication :
-Wong,K.K., "Direct Submission", Submitted (21-APR-1998) Molecular Biosciences, Pacific Northwest National Laboratory, P7-56, Battelle Blvd., Richland, WA 99352, USA.
-Wong,K.K., McClelland,M., Stillwell,L.C., Sisk,E.C., Thurston,S.J. and Saffer,J.D., "Identification and sequence analysis of a 27-kilobase chromosomal fragment containing a Salmonella pathogenicity island located at 92 minutes on the chromosome map of Salmonella enterica serovar typhimurium LT2", Infect. Immun. 66 (7), 3365-3371 (1998) PUBMED 9632606.
| DNA sequence : | |
ATGGTGTGTGTGAGTGGCGGGCAAAAAATAAAGTTGGTAAACGCGCGCGGTGAACTCTGTTATGTTGAAATTGAAGATGA
ATATTTAAAAGAGTTATCTGCATTTAGTATACTACCTTTAAATAAAGTTGTTGATAGTATAAGAGTAAAAAATATCATAA
AAAACTCTTTATCGATGAACAAGATTTTTTATACTAAATACTTTTTTTCATCTCTTTTTATGGCAATTTTTGCGTTAACT
ATCCCAGTATTTAGTAATCTGTTCTATGATAAGCTTGTTCCAAGCGCTTCGGTTTCATCTTTATTTGGCGTGGCTATAAT
TGTTGCTGTATTTATTGTTTTTGAGTTTATCCTTCGTACTTCGAAAGATATTTATCAGTCTATCACAGCAAGGCAGGATG
ACGTCGATATTGATATCGCATTTCTTGAAGCGGTACTTTATAGTAAAAAGAAAAATGGCAGATCCATGTCATCAGCATTT
GTGCTATGGAATGAGTTTCAGAAAATTAAACCCGTTTTATTAAACTCGATCTTTCAACGTATAGCCGATATTCCAATATT
TATTATATTTCTCATTGTTATATATGTAAATTTAGGTCTGGTTGTTATTGTACCTATTACCATGTTTATCGTCTCTATTA
TTATTTCCCTCGTTAACCACCATTATACTAATGAGTTAATGAACAAACAAAAAGAAGGACAGAAGAACAGGAATATTTTT
ATCTCAGAAGTTTTCTTATCTATTAAAATGATCCATACCTTAAATAATCAAGGTTTACTTTTTGATTGGGTTAATACATC
AAATGAACAGTCGTATCTTAACCTGAAGATAAGGAAATTAAATCTTATCTATCAATCTATATTGGGGAGTATGTCATCTA
TTACCCAAATAACTATTATGGTAATAGCCTTTTTTATGGTAATCAAGGGTGATGTTACTACTGGCGCAATTGTTTCATCT
GTCATTGTCTCTGGCCGTATTTCCGGGATCATTTCGAATTTTTCTTCTACATTAATCTCTATTTTATCAGCAGAAAAAAC
CGGTAAGGATCTGCTTTCTTTTTTTGATGAAGATCAGGCAGAAAAAACACCGGCATTACAGTCAATATCAAAGTGCAATG
GCGATATCTCTATCCGGGGCGTGAGTTATCAGTATGATGCTCAATCTCCGATGATTATTAACCGACTGTCTATAGACATA
CCTGCGGGGCAACGTGTCGCGGTGGTAGGCGAATGCGGAGCAGGAAAAAGCTCATTACTGGGAATGCTATCTGGCTACCT
TTCGCCAACAGACGGTGCCATTTTATATGATGGATATAACTTAGGACATTTATCGCAGAACTTTTTTTCTCAGCATTTAA
GCGTGGTGACGACACATGATGTTTTATTCACCGGAACCATTGAAAGTAATTTCGCGTTAAAACCGCAAAACGACAGGGGC
CGGGTACTCAAGGCGCTTCAGCTGGCGAACTGTGGTTTTATCTTGCAACATCCTATGGGGCTGAAGTTTCCGGTGAATTT
TATGGCTAAAAACCTGTCATCCGGACAGCAGCAGCAGTTATTATTAGCACGTAGTCTGAGTAGTGACGCCAGCGTCTTTT
TATGGGATGAACCAACATCAAATCTGGATGAGAATACCGAGAAGCAAATTTTTGATAACTTAGATGAGTTTATTCATGGG
AAAACGTTGATCATGGTGACGCATCGTCGATATCTGATAAAGTATTTTGACCGGGTCCTGGTAATGAAAGGTGGAAAAAT
AATCCGTGATTGTTCTCCGGATAAATTATTAATGTAA
|
| Protein sequence : | |
MVCVSGGQKIKLVNARGELCYVEIEDEYLKELSAFSILPLNKVVDSIRVKNIIKNSLSMNKIFYTKYFFSSLFMAIFALT
IPVFSNLFYDKLVPSASVSSLFGVAIIVAVFIVFEFILRTSKDIYQSITARQDDVDIDIAFLEAVLYSKKKNGRSMSSAF
VLWNEFQKIKPVLLNSIFQRIADIPIFIIFLIVIYVNLGLVVIVPITMFIVSIIISLVNHHYTNELMNKQKEGQKNRNIF
ISEVFLSIKMIHTLNNQGLLFDWVNTSNEQSYLNLKIRKLNLIYQSILGSMSSITQITIMVIAFFMVIKGDVTTGAIVSS
VIVSGRISGIISNFSSTLISILSAEKTGKDLLSFFDEDQAEKTPALQSISKCNGDISIRGVSYQYDAQSPMIINRLSIDI
PAGQRVAVVGECGAGKSSLLGMLSGYLSPTDGAILYDGYNLGHLSQNFFSQHLSVVTTHDVLFTGTIESNFALKPQNDRG
RVLKALQLANCGFILQHPMGLKFPVNFMAKNLSSGQQQQLLLARSLSSDASVFLWDEPTSNLDENTEKQIFDNLDEFIHG
KTLIMVTHRRYLIKYFDRVLVMKGGKIIRDCSPDKLLM
|
|
