Name : unnamed
Accession : AAC12272.1
PAI name : VPI
PAI accession : AF034434
Strain : Vibrio cholerae IEC224
Virulence or Resistance: Not determined
Product : putative transposase
Function : -
Note : similar to bfpM-like protein; hypothetical Orf1
Homologs in the searched genomes : 27 hits ( 27 protein-level )
Publication :
-Karaolis,D.K., Johnson,J.A., Bailey,C.C., Boedeker,E.C., Kaper,J.B. and Reeves,P.R., "A Vibrio cholerae pathogenicity island associated with epidemic and pandemic strains", Proc. Natl. Acad. Sci. U.S.A. 95 (6), 3134-3139 (1998) PUBMED 9501228.
-Karaolis,D.K.R., Johnson,J.A., Bailey,C.C., Boedeker,E.C., Kaper,J.B. and Reeves,P.R., "Direct Submission", Submitted (14-NOV-1997) Center for Vaccine Development, University of Maryland School of Medicine, 685 W. Baltimore Street, Room 480 HSF, Baltimore, MD 21201, USA.
| DNA sequence : | |
ATGGACAGAGAAATCCAACAAAGACTACAGTGGGTAAAAATGTATGAGGAATGTGGTGATGCAGGCCTCGTATGTCGACG
CTGTGGTATTTCCAGACCAACATTACGAAAGTGGGCTAAGCGATATAAGCAATGTGGAATCGCTGGTCTGGAAAGCCAGA
GCAGACGCCCTCATTCATCTCCAGATACCAAACTCACTGATGAGCTAAGAGCATTGATCCTTACGATGCGTGACAAACGC
AATTTAGGGGCGCGACGTTTACAAACGGAATTAATCCGACTTCACAAAATACACCTAAGCACAGCGACACTCCATAAAGT
TTTATCCGAAGCATCAGTCAAACCCATCGTAACTTACCGACGCAAAAAAGATTTCCAAAGATATGAGCGCCCAATTCCTG
GTGATAGAGTCCAGATGGACACGTGTAAAATAGCGCCTGGAATTTACCAGTATACAGCTATTGATGATTGCTCTCGCTAT
CGGGTTCTAAGGTGCTACTCTCGGCGCACAGCAGCAAATACAGTCGACTTTATCGATTGTGTCGTGGAAGAGATGCCATT
TCCTATCCAGCGTATTCAGACGGACAGAGGGCGTGAATTCTTTGCTGAAAAAGTCCAGAAACAACTCATGATTTATGGGA
TCAAGTTTCGCCCAAATAAGCCTGGCTCACCTCACTTGAATGGCAAAGTGGAACGCTCGCAGAAAACAGATAAAAGTGAG
TTCTATCCGACCATAGATGTCTCTGTGGGGCTGCAAGAACTGGATCTGCTACTAGCTGAATGGCAACACTACTACAACTG
GGAACGGCCCCACAGCTCGTTAAATGGGCTAACCCCGATAGACAGGATTACTGAGATATCTGATCAAACTCCTTTGTCTG
AAGAGGTATCTCAGAACTACCAGATCAAGAAAGAGCGGTTTCAAGAGCAAAATTACAAGCTCGATCTTCAGCTAAGAAAA
TTGAAACCATCTCTATGA
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| Protein sequence : | |
MDREIQQRLQWVKMYEECGDAGLVCRRCGISRPTLRKWAKRYKQCGIAGLESQSRRPHSSPDTKLTDELRALILTMRDKR
NLGARRLQTELIRLHKIHLSTATLHKVLSEASVKPIVTYRRKKDFQRYERPIPGDRVQMDTCKIAPGIYQYTAIDDCSRY
RVLRCYSRRTAANTVDFIDCVVEEMPFPIQRIQTDRGREFFAEKVQKQLMIYGIKFRPNKPGSPHLNGKVERSQKTDKSE
FYPTIDVSVGLQELDLLLAEWQHYYNWERPHSSLNGLTPIDRITEISDQTPLSEEVSQNYQIKKERFQEQNYKLDLQLRK
LKPSL
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