Name : hrcU
Accession : AAB06008.1
PAI name : Hrp PAI
PAI accession : L25828
Strain : Erwinia amylovora ATCC 49946
Virulence or Resistance: Virulence
Product : HrcU
Function : -
Note : type III secretion pathway; unusual start codon TTG
Homologs in the searched genomes : 24 hits ( 24 protein-level )
Publication :
-Beer,S.V., "Direct Submission", Submitted (06-NOV-1993) Plant Pathology, Cornell University, Ithaca, NY 14853, USA.
-Beer,S.V., "Direct Submission", Submitted (08-AUG-2005) Plant Pathology, Cornell University, 334 Plant Science Building, Ithaca, NY 14853, USA REMARK Nucleotide sequence updated by submitter.
-Beer,S.V., "Direct Submission", Submitted (13-MAR-2006) Plant Pathology, Cornell University, 334 Plant Science Building, Ithaca, NY 14853, USA REMARK Sequence update by submitter.
-Bogdanove,A.J., Wei,Z.M., Zhao,L. and Beer,S.V., "Erwinia amylovora secretes harpin via a type III pathway and contains a homolog of yopN of Yersinia spp", J. Bacteriol. 178 (6), 1720-1730 (1996) PUBMED 8626302.
-Oh,C.S., Kim,J.F. and Beer,S.V., "The Hrp pathogenicity island of Erwinia amylovora and identification of three novel genes required for systemic infectiondouble dagger", Mol. Plant Pathol. 6 (2), 125-138 (2005) PUBMED 20565644.
-Wei,Z.M. and Beer,S.V., "HrpI of Erwinia amylovora functions in secretion of harpin and is a member of a new protein family", J. Bacteriol. 175 (24), 7958-7967 (1993) PUBMED 8253684.
| DNA sequence : | |
TTGGCAGAAAAAACGGAAAAACCCACGGCGAAAAAGCTACAGGATGCGCGCCGCAAAGGTCAGGTCCCGCAAAGCCAGGA
TGTGCCGAAGCTGCTGATTTGCGCCGGGGTGGTGGAAACCGTGCTGGCGCTGGACGATGTCGGTATGCAAAAGCTTCAGG
CGCTGATGATGCTGCCGCTGGCGCGGATTGGTCAGCCCTTTGAACTGGCGTTAAGCGAGGTGGTGAGCAGCGCCATAATA
CTGGTGGCGACTTTCTGCGGCCTGACGGTGGCGATAGCGGCGCTGCTGCGCATCATCGGTGGCTGGATCCAGTACGGCCC
GCTGTTTGCCCCGGAGGCGCTGCAGCCGGATTTCAACCGCCTGAACCCGATCAATCAGTTCAAGCAAATGTTTTCCGTAA
AAAAACTCAGTGAAATGCTTAACAGCATCGTGAAGGCCGTGGCCATCTGCACCATTTTTTATCTGGTGCTGACGCCGGAC
CTCGAATCACTGTCCCGTCTGGCTTATGGCGATCTCGACAGCTTCTGGCCCGCCGTAGAAACGCTGTTGATCCACGTTTC
TCGCCAGACGCTGCTGACATTGCTGGTACTGACGCTGCTGGACTTCGGCCTGCAAAAATACTTTTTCATCAAACAGCAGC
GCATGAGCCATCAGGACATTCGCGATGAACACAAACAGTCCGAAGGCGATCCGCATATGAAAGGCCACCGTCATGCGCTG
GCGCATGAGCTGCTTAATCAGCCGGCGACGGCGGTCAAGAGCAAGCCGGTAGAAGAAGCCGACCTGCTGCTGGTCAATCC
CACGCACTATGCGGTTGCGCTCTATTATCGCCCGGAGCTGACCCCGCTGCCGCGTATTATTTGTAAGGGGGAGGATCAGC
AGGCTAAAGAGCTGATTGCCCGCGCGCAGCAGGCCAATATCCCGGTTATCCGCTTTATCTGGCTGGCGCGCACGCTTTAC
CGCTCCCAGGAGGGGCAGCTGATCCCACGCCATACGTTGCAGGCGGTAGCCCAGGTTTACCGCGTGCTGCGTCAGCTGGA
AGACCAGATAACCGATGAGGTGATCGAACTGGAAGCCGAATAA
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| Protein sequence : | |
MAEKTEKPTAKKLQDARRKGQVPQSQDVPKLLICAGVVETVLALDDVGMQKLQALMMLPLARIGQPFELALSEVVSSAII
LVATFCGLTVAIAALLRIIGGWIQYGPLFAPEALQPDFNRLNPINQFKQMFSVKKLSEMLNSIVKAVAICTIFYLVLTPD
LESLSRLAYGDLDSFWPAVETLLIHVSRQTLLTLLVLTLLDFGLQKYFFIKQQRMSHQDIRDEHKQSEGDPHMKGHRHAL
AHELLNQPATAVKSKPVEEADLLLVNPTHYAVALYYRPELTPLPRIICKGEDQQAKELIARAQQANIPVIRFIWLARTLY
RSQEGQLIPRHTLQAVAQVYRVLRQLEDQITDEVIELEAE
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