Gene Information

Name : DGI_0835 (DGI_0835)
Accession : YP_008589900.1
Strain : Desulfovibrio gigas ATCC 19364
Genome accession: NC_022444
Putative virulence/resistance : Virulence
Product : putative cation effux pump BexA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 913650 - 914321 bp
Length : 672 bp
Strand : +
Note : -

DNA sequence : 
ATGGTAGAAGCTAAAAAAATATGCAAAGTCTATATGACCCGGAAGGGCCCGCGTGACATCCTGAAGAACATCTCCTTCTG
CATTCACAAGGGCGATAAGCTGGGCATCCTCGGCTGCAACGGGGCCGGCAAATCAACGCTGATCCGGGTCATCAGCGGTG
CGGAACTGCCCACTTCCGGCGAAATCGAGCGGACCATGTCCGTCTCCTGGCCGCTGGCCCTGCAGGGGGGGTTCGTGGGG
CACATGACCGGGACGGACAATCTGCGCTTCATCAGCCGCATCTATAATGTTGAGTTCAAACAGGCCCTTGAGTACGTAAA
GGATTTTTCCGAACTCGGCACCTACCTGTACGAGCCGGTGAATACGTATTCGTCCGGCATGCGCGCCCGGCTGGCCTTTG
CCATCTCCATGGCCGTGGATTTTGACTGCTATCTCATCGACGAGATCTCTGCCGTTGGTGACAAGCGCTTTAACAAAAAG
TACAAGGACACCCTGTTCAACGAAAAAGGCGACCGGTCCCTGATCATGGTCTCCCATTTTTACGGCGTCATTCAGGAATA
CTGCAACAAGGTCGCCGTACTCGACCAGGGACGCCTGGCCGTGTTCGACGACCCGAAAGAGGCCATCGCCCTGTACGACC
GCGTGCTTGCAGGGCAGCAGATCACCTTTTGA

Protein sequence : 
MVEAKKICKVYMTRKGPRDILKNISFCIHKGDKLGILGCNGAGKSTLIRVISGAELPTSGEIERTMSVSWPLALQGGFVG
HMTGTDNLRFISRIYNVEFKQALEYVKDFSELGTYLYEPVNTYSSGMRARLAFAISMAVDFDCYLIDEISAVGDKRFNKK
YKDTLFNEKGDRSLIMVSHFYGVIQEYCNKVAVLDQGRLAVFDDPKEAIALYDRVLAGQQITF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ctrD NP_273138.1 capsule polysaccharide export ATP-binding protein CtrD Not tested IHT-A Protein 1e-57 57
kpsT YP_854396.1 polysialic acid transport ATP-binding protein KpsT Not tested PAI I APEC-O1 Protein 5e-40 44
kpsT CAE85223.1 KpsT protein Virulence PAI V 536 Protein 4e-41 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DGI_0835 YP_008589900.1 putative cation effux pump BexA VFG0258 Protein 5e-58 57
DGI_0835 YP_008589900.1 putative cation effux pump BexA VFG0696 Protein 5e-57 56
DGI_0835 YP_008589900.1 putative cation effux pump BexA VFG2563 Protein 4e-53 55
DGI_0835 YP_008589900.1 putative cation effux pump BexA VFG1449 Protein 2e-40 44