|
Name : DGI_0421 (DGI_0421) Accession : YP_008589508.1 Strain : Desulfovibrio gigas ATCC 19364 Genome accession: NC_022444 Putative virulence/resistance : Unknown Product : putative seryl-tRNA synthetase Function : - COG functional category : - COG ID : - EC number : - Position : 451960 - 453237 bp Length : 1278 bp Strand : + Note : - DNA sequence : ATGCTCGACATCAAACGCCTGCAGAAAGATCCGGACGCCATCCGTCAGGCCCTGGCCCATCGGCATTCTCCCCTGAATGT GGATGATTTTCTGACCCTGGACGACGAGCGCCGCCGACTCATCCAGGAAACCGACGCCCTGAAGGCTGAACGCAACACCG CGTCCGCCGAAATCGGCAAACGCAAGCGCAGCGGCGAGCCTGCGGAAGCCCTCATGGCCCGCATGGGCGAGGTGAACGCC CGCATCAAGGAACTGGATGTGCTGCTGGCCGAGGCCGACGCCAAGGTGGAAGCCTGGATGCTCGCCTGTCCCAACGCGCC CCATGCCAGCACCCCCGTGGGCGCTTCCGAGGCCGACAATCCCGTGGTGCATGTGTGGGGCGAAAAGCCGGCCTACGACT TCGCCCCCAAGGAACATTGGGAGCTGGGCGCGACCCTGGGCGGACTGGACTTTGAACGCGCGGCCAAGATCTCCGGGGCC CGCTTCGCCGTCTCCTGGGGCTGGGCTGCCAGGCTGGAGCGCGCCCTGGCGGCCTTCATGCTGGACGTGCACACCCAGGA AAACGGCTACACCGAGGTGGCCACGCCGGTCATCGTCACCGCCAAAACCCTCTACGGCACCGGGCAACTGCCCAAGTTCG CCGAGGATCTGTTCAAGCTCGAAGGCACGGACCAGCACCTCATCCCCACGGCAGAGGTGCCCGTGACCAATCTGCACGCC GACGAAACCCTGCCTGAAGAGTCCCTGCCACGGGCCTACTGCGCCCACACGCCCTGCTTCCGCTCCGAGGCGGGCAGCGC AGGCAAGGACACCCGCGGCCTCATCCGCCTGCATCAGTTCAACAAGGTGGAGCTGGTGCGCCTCTGCCGCCCCGAAGACA GCTATGCCGAGCTGGAGACACTGCGCCGCCACGCGGAATCCATCCTCCAGAAGCTGGGCCTGCATTATCGCGTCATCGAA TTATGCACCGGTGACATTGGCTTTTCCTCGGCCAAGACATACGACCTGGAAGTCTGGCTGCCCGGCCAGAACGCCTACCG CGAAATCTCCAGCTGCTCCAATTGCGAAGACTTCCAGGCCCGCCGCGCCGGCATCCGCTGCAAGAGCAAGGCGGACAAGA AATCCCGCCTCGTCCACACCCTGAACGGCTCCGGTCTGGCCGTGGGCCGCACCCTGGTGGCTGTGCTGGAAAACGGCCAG CGCGCCGACGGCAGCGTGGTCATTCCCGAGGCCCTGGTGCCGTATATGGGCGGACTGCGGGTCATCACGCCGGCATAA Protein sequence : MLDIKRLQKDPDAIRQALAHRHSPLNVDDFLTLDDERRRLIQETDALKAERNTASAEIGKRKRSGEPAEALMARMGEVNA RIKELDVLLAEADAKVEAWMLACPNAPHASTPVGASEADNPVVHVWGEKPAYDFAPKEHWELGATLGGLDFERAAKISGA RFAVSWGWAARLERALAAFMLDVHTQENGYTEVATPVIVTAKTLYGTGQLPKFAEDLFKLEGTDQHLIPTAEVPVTNLHA DETLPEESLPRAYCAHTPCFRSEAGSAGKDTRGLIRLHQFNKVELVRLCRPEDSYAELETLRRHAESILQKLGLHYRVIE LCTGDIGFSSAKTYDLEVWLPGQNAYREISSCSNCEDFQARRAGIRCKSKADKKSRLVHTLNGSGLAVGRTLVAVLENGQ RADGSVVIPEALVPYMGGLRVITPA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 2e-111 | 58 |
