Gene Information

Name : DGI_3130 (DGI_3130)
Accession : YP_008592014.1
Strain : Desulfovibrio gigas ATCC 19364
Genome accession: NC_022444
Putative virulence/resistance : Virulence
Product : putative ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3292894 - 3293640 bp
Length : 747 bp
Strand : +
Note : -

DNA sequence : 
GTGGCGCGCTCCTTCGCCAGAACCGCGGGGCAGATCCTGGAAGATCGCGCCGGCAATGAGCACAACGGGAGCAATGGCGG
CAGCAATGGGGAAGACGCCAACGCCGTCACCGTGCTGCGGGACGTCACGCTGCGGATCATGCCCGGCGAGTTCGCGGCGC
TGCAGGGCACGTCCGGGTCGGGCAAGTCCACCCTGCTGCACATCCTGGGCCTGCTGGACCGCGCCAGCCGCGGCACGTAT
GCGCTGCTGGGCAAGGATGTCTCGCATCTGTCGGATGATGCCTTGTCCACCCTGCGCAGCCGGCACATTGGCTTCGTGTT
CCAGAGTTTTTACCTCATCCCCTATGCCACGGCCCTGGACAACGTGCTCATGCCCGGGCTGTACACCAAGGTTTCCCATC
GCCAGCTGGTGCAGCGCGCCCGGGAGCTGCTGACCATGGTGGGCCTGGCCGACCGCATGCACCACAAGCCCAGCCAGCTT
TCCGGCGGCCAGCAGCAGCGGGTGGCCCTGGCCAGGGCGCTGATGAACCGCCCGTCCCTGGTGCTGGCCGACGAACCCAC
GGGACAGCTGGACTCGCGCACCACCCGGGAAATCCTGGACCTGCTCCGCACCATCAACGAGCAGGGCGCCACGGTGATTC
TGGTGACGCATGACCCCAATGTGGCCGCCTACGCCAGACGTCGCCTGCACATGGAAGACGGACGCATTGTGCGCGATGAG
CAGGCCGGCACGGCTGCCGCCGGGTAA

Protein sequence : 
MARSFARTAGQILEDRAGNEHNGSNGGSNGEDANAVTVLRDVTLRIMPGEFAALQGTSGSGKSTLLHILGLLDRASRGTY
ALLGKDVSHLSDDALSTLRSRHIGFVFQSFYLIPYATALDNVLMPGLYTKVSHRQLVQRARELLTMVGLADRMHHKPSQL
SGGQQQRVALARALMNRPSLVLADEPTGQLDSRTTREILDLLRTINEQGATVILVTHDPNVAAYARRRLHMEDGRIVRDE
QAGTAAAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed ABA47263.1 ABC transporter Not tested S-PAI Protein 2e-15 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-26 42
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 3e-26 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-27 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 5e-27 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DGI_3130 YP_008592014.1 putative ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 9e-38 50
DGI_3130 YP_008592014.1 putative ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-46 50
DGI_3130 YP_008592014.1 putative ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 4e-36 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DGI_3130 YP_008592014.1 putative ABC transporter ATP-binding protein VFG0869 Protein 2e-29 42