Gene Information

Name : DGI_3051 (DGI_3051)
Accession : YP_008591939.1
Strain : Desulfovibrio gigas ATCC 19364
Genome accession: NC_022444
Putative virulence/resistance : Resistance
Product : putative D-Ala-D-Ala dipeptidase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3212706 - 3213389 bp
Length : 684 bp
Strand : -
Note : -

DNA sequence :
ATGAAGTCGATTCGTCTGTTATTGAGCGTGGTTGTCCTGCACTGGATGCTGTACGCCGTCGCGTCTGCCGCGGCCCTGCC
CGATGGCTTTGTGTATCTGGAGGAGCTGGCCCCGGGCATCCTGCTGGATGTGCGGTATTTCGGCCAGGACAACTTTGTGG
GCGCCAGGGTGGACGGCTACCTGGCCCCCAGGGTGATCCTCACCCGCCAGGCCGCCGAGGCCCTGGTCCGGGTGCAGGCG
CAGCTGGAGGCCTTCGGCCTGGGGCTGCTGGTGTTCGACGGCTACCGCCCCCAGCGCGCCGTGGAGCATTTCCAGCGCTG
GGCCAGGGATCTGCAAGACGTCAAGACCAAGCCGCGTTACTACCCCGACGTGCCCAAGGAAGAACTCTTCGTCCGGGGCT
ACATCGCCGCGCGCTCCAGCCACAGCCGCGGCTCCACCGTGGATCTGACCATTGTGGACCGCACCACCGGCACGCCCCTG
GACATGGGATCCCCCTTCGATTTCTTCGGCCCTGTCTCCTGGCCGTCCTCCATGGAGGTGGGGGCCGACCAACGGGCCCG
GCGCATGCTGCTGCAAACACTGATGGTGGGGCAGGGCTTCAAGATTTACGACCAGGAATGGTGGCACTTCACCCTGAAGG
ATGAGCCGTTCCCGGAGACGTATCACGACTTCCCTGTGGAATAG

Protein sequence :
MKSIRLLLSVVVLHWMLYAVASAAALPDGFVYLEELAPGILLDVRYFGQDNFVGARVDGYLAPRVILTRQAAEALVRVQA
QLEAFGLGLLVFDGYRPQRAVEHFQRWARDLQDVKTKPRYYPDVPKEELFVRGYIAARSSHSRGSTVDLTIVDRTTGTPL
DMGSPFDFFGPVSWPSSMEVGADQRARRMLLQTLMVGQGFKIYDQEWWHFTLKDEPFPETYHDFPVE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vanX NP_815950.1 D-alanyl-D-alanine dipeptidase Not tested Not named Protein 3e-40 45
vanXB YP_008394260.1 D-alanyl-D-alanine dipeptidase Not tested Not named Protein 2e-39 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DGI_3051 YP_008591939.1 putative D-Ala-D-Ala dipeptidase AE016830.1.gene2249. Protein 1e-40 45
DGI_3051 YP_008591939.1 putative D-Ala-D-Ala dipeptidase U82965.2.orf32.gene. Protein 5e-46 45
DGI_3051 YP_008591939.1 putative D-Ala-D-Ala dipeptidase AF130997.1.orf5.gene Protein 2e-40 44
DGI_3051 YP_008591939.1 putative D-Ala-D-Ala dipeptidase AF310956.2.orf6.gene Protein 9e-40 44
DGI_3051 YP_008591939.1 putative D-Ala-D-Ala dipeptidase U35369.1.gene7.p01 Protein 3e-40 44
DGI_3051 YP_008591939.1 putative D-Ala-D-Ala dipeptidase AF155139.2.orf6.gene Protein 2e-39 44
DGI_3051 YP_008591939.1 putative D-Ala-D-Ala dipeptidase M97297.gene.p01 Protein 3e-39 42
DGI_3051 YP_008591939.1 putative D-Ala-D-Ala dipeptidase NC_014475.1.orf4.gen Protein 3e-39 42
DGI_3051 YP_008591939.1 putative D-Ala-D-Ala dipeptidase NC_005054.2598281.p0 Protein 3e-39 42
DGI_3051 YP_008591939.1 putative D-Ala-D-Ala dipeptidase FJ349556.1.orf5.gene Protein 3e-37 41