|
Name : DGI_2888 (DGI_2888) Accession : YP_008591785.1 Strain : Desulfovibrio gigas ATCC 19364 Genome accession: NC_022444 Putative virulence/resistance : Unknown Product : putative oligopeptide/dipeptide ABC transporter ATP-binding protein Function : - COG functional category : - COG ID : - EC number : - Position : 3034863 - 3036473 bp Length : 1611 bp Strand : - Note : - DNA sequence : ATGCCCGGTCCTCTCCTCGATATCCAGGATCTGCGCATCGGCTTCCTGACCGGCGATGTTGGCAGCGGTGCAGTGGTCCA GGCGGTGCAGGGCGTCTCCCTGCAGGTGCATGCCGGCGAGACGCTGGCCCTGGTGGGCGAGTCCGGCTCCGGCAAAACCG TCACGGCGCTGTCGGCGCTCAGGCTCCTGCCCCCGCGGGAGACGGTCTATGGCGGACGGATTCTGCTGGACGGGACGGAC GTGCTGAACGCCTCGCCCCGCACCCTGCGGCAGTTGCGCGGCGGCGCGGCGGGGGTGATCTTCCAGGAGCCCATGACCGC CCTCAATCCCCTGCACACCGTGGAAGGGCAGATTGGCGAAGTGCTGGCCCTGCACAAGGGGCTGACCAACGCCGCCGCCC GGCGGCGGGTGCTGGAGCTGCTGGAACTGGTGGGCATCGACCGGCCCGAGACCCGGCTGAAGGCGTACCCGCACCAGCTT TCCGGCGGGCAGCGACAGCGGGTGATGATTGCCATGGCCCTGGCCGGGGAGCCGAAGCTGCTCATCGCCGACGAGCCCAC CACCGCCCTGGACGTGACCATCCAGGCGCAGATCCTCGAACTCATCGCCGATCTGCAACGCCGCCTGGGCATGGCCGTGC TGCTCATCACCCACGACCTCGGCGTGGTGCGCAGTGTGGCGCATCGCACGGCGGTGATGCATCTGGGTGAGCTCAAGGAA GTGCAGCCCACGGCGGCGCTGTTTGCCGCACCGCAGCACGACTACACCAAAATGCTCCTGGCTGCGGAGCCCGCCGGCGC GCCCGCGCCCGTGCGGCCGGATGCGCCGGTGCTCCTGGAGACGCAGGATCTGCGGGTATGGTTCCCCGTCAGGCGCGGGG TGTTCCGCCGCACCGTGGGGCACGTGAAGGCCGTGGACGGCATCAGCTTCGCCATTCGGGAAGGGGAAAGCCTGGGCATT GTGGGCGAATCCGGCTCGGGCAAGACCACCCTGGGCCTGGCGGCCCTGCGGCTGGAACGCAGCGAGGGCGGCCTGCGTTT TGCCGGGCAGGATCTCCGTACCCTGCAGCACCGGGACGCCGCGGCCATGCGCACCCTGCGCCAGTCCATGCAGATCGTCT TTCAGGATCCCTTTGGCAGCCTCTCGCCGCGCCTGACCATTCAACAGATCGTGGACGAAGGTCTGGTGGTGCAGCAGGTG CGGGACCGGGCGGAGCGCGAACGCCGCGTGGCCGAGGCCCTGACCGCCGTGGGGCTGGACCCGGCCATCCGGGAGCGTTA CCCGCATGAGTTTTCCGGTGGCCAGCGCCAGCGCATCGCCATTGCCCGGGCCCTGGTGCTCAGGCCGCGGCTGGTGGTGC TGGACGAGCCGACATCGTCGCTGGATCGTTCGGTGCAGGCCCAGGTGGTGGCGCTGTTGCGGGATCTGCAGACGCGCTAC GGCCTGGCCTATTGCTGCATCAGCCACGATCTGAAGATCGTGCGCGCCCTGTGTCACCGCATTCTGGTCATGCGCCAGGG GGTGGTGGTGGAGGAGGGGGATCGGGACGCCATCTTCAACGCCCCGCAGCACCCGTACACCCAGGCCTTGCTGGCGGCGG CGCTGCGGTAG Protein sequence : MPGPLLDIQDLRIGFLTGDVGSGAVVQAVQGVSLQVHAGETLALVGESGSGKTVTALSALRLLPPRETVYGGRILLDGTD VLNASPRTLRQLRGGAAGVIFQEPMTALNPLHTVEGQIGEVLALHKGLTNAAARRRVLELLELVGIDRPETRLKAYPHQL SGGQRQRVMIAMALAGEPKLLIADEPTTALDVTIQAQILELIADLQRRLGMAVLLITHDLGVVRSVAHRTAVMHLGELKE VQPTAALFAAPQHDYTKMLLAAEPAGAPAPVRPDAPVLLETQDLRVWFPVRRGVFRRTVGHVKAVDGISFAIREGESLGI VGESGSGKTTLGLAALRLERSEGGLRFAGQDLRTLQHRDAAAMRTLRQSMQIVFQDPFGSLSPRLTIQQIVDEGLVVQQV RDRAERERRVAEALTAVGLDPAIRERYPHEFSGGQRQRIAIARALVLRPRLVVLDEPTSSLDRSVQAQVVALLRDLQTRY GLAYCCISHDLKIVRALCHRILVMRQGVVVEEGDRDAIFNAPQHPYTQALLAAALR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 1e-70 | 42 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-60 | 41 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-60 | 41 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 2e-60 | 41 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 2e-60 | 41 |
