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Name : recQ (DGI_2618) Accession : YP_008591519.1 Strain : Desulfovibrio gigas ATCC 19364 Genome accession: NC_022444 Putative virulence/resistance : Unknown Product : putative replicative DNA helicase Function : - COG functional category : - COG ID : - EC number : - Position : 2738678 - 2739991 bp Length : 1314 bp Strand : + Note : - DNA sequence : GTGCTGGGGGGGGTGCTCATCAAAGCTGTCACCCTCTCGTCCATTGCGGAAGTCGTTTCCGCAGACGATTTTTACTACCC CCAGCATCGCTTCATTTACCAGGCCTGCCTGGAACTTTCCGGCCGCAATCTGCCTGTGGACATGGTGTCCGTGGCCGAGC ACCTGCGGCGGGAAAAAAAGCTGGACGACGCCGGCGGCCCCACCTATCTGGCCGAGCTCTCCGAAAGCGTCATCGGCGCG GCCAACGCCTACTATCACGCCACCATCATTCGGGACAAATCCCTGCAGCGCCAGCTCATCGAGGCTGGCAGCAAGATTGT GTCCGAGAGCTTCGAGCCGCGTCCAGAAATCAACGAACTGCTTGAATTTGCCGAAAAAACCGTCTTCGACATCTCCCAGC GTCAGGTGGGGTCATCCATCACCCCGGCCAACGATCTGGTGCGCCTGGTCTTCGACGAACTCACGGCCCGCTTTGAGAAC AAACAGGCCGTCACCGGCGTGCCCACGGGCTACCACAAGCTCAACGAGCTCACCGCCGGGTTGCAGCCGACAGACCTGAT CATCATCGCCGGCCGGCCAGCCATGGGCAAAACGGCGTTCGCACTCAATGTCTGCATGCGCGCAGCCATCCAGGGCGGCA CGTCCACGGTGGTCTTTTCCCTGGAAATGGGCAAGGAACAGCTCATGCAGCGCATGCTCTGCGCCTGGGGCAAGGTGGAT CTCTCCAAGATGCGGCGCGGCAACATCAACGACGAAGACTGGACCAAGCTGCACGCCGCGGCAGACCACTTCTCCCGGGC CAACCTGTTCATCGATGACACGCCGGCTTTGAGCGTCACCGAGCTGCGCGGCCGCTGCCGCCGGCTCAAGCGCGAAAAAA ACCTCGGCCTGGTGGTGGTGGATTACCTGCAGCTCATGCGCGCCAGCCGCCGCATTGACAGCCGCGAGCAGGAAATTTCG GAAATCTCCCGCAGCCTGAAGGCCCTGGCCAAGGAGCTGCACCTGCCTGTGGTGGCCCTCTCCCAGCTCAACCGCAAACT GGAAGAACGCGGTGACAAACGCCCCCAGCTCTCGGACCTGCGCGAATCCGGCGCCATTGAGCAAGATGCGGACGTCATCA TGTTCCTCTATCGCGACGAAGTGTACAACAAGCGCGAGGACAACCCCAAGCGGGGCGTGGCGGAAGTCATCATCGGCAAG CAGCGCAACGGCCCCCTGGGCGTGGTGGAGCTGGCCTATGTGGGCGCGTACACGGCCTTTGAAGAACTGGAAGACCGCTA TTCGGGCTATGAGCCCCAGGGAGCCGCATCATGA Protein sequence : MLGGVLIKAVTLSSIAEVVSADDFYYPQHRFIYQACLELSGRNLPVDMVSVAEHLRREKKLDDAGGPTYLAELSESVIGA ANAYYHATIIRDKSLQRQLIEAGSKIVSESFEPRPEINELLEFAEKTVFDISQRQVGSSITPANDLVRLVFDELTARFEN KQAVTGVPTGYHKLNELTAGLQPTDLIIIAGRPAMGKTAFALNVCMRAAIQGGTSTVVFSLEMGKEQLMQRMLCAWGKVD LSKMRRGNINDEDWTKLHAAADHFSRANLFIDDTPALSVTELRGRCRRLKREKNLGLVVVDYLQLMRASRRIDSREQEIS EISRSLKALAKELHLPVVALSQLNRKLEERGDKRPQLSDLRESGAIEQDADVIMFLYRDEVYNKREDNPKRGVAEVIIGK QRNGPLGVVELAYVGAYTAFEELEDRYSGYEPQGAAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 5e-62 | 44 |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 5e-71 | 44 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 6e-71 | 43 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 1e-70 | 43 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 3e-65 | 43 |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 1e-63 | 42 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 1e-63 | 42 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 1e-62 | 41 |
