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Name : clpA (DGI_2573) Accession : YP_008591476.1 Strain : Desulfovibrio gigas ATCC 19364 Genome accession: NC_022444 Putative virulence/resistance : Virulence Product : putative type VI secretion ATPase, ClpV1 family Function : - COG functional category : - COG ID : - EC number : - Position : 2691999 - 2694845 bp Length : 2847 bp Strand : - Note : - DNA sequence : ATGATTGTAGACGTCAAACTCCTTTTGGAACGCTGTTCCGCACAACTCACGGAAGCCATGCAGGAAGCCGCGGCCCTGGC CAGCGGGCAGGCCCATGGCGAGGTGCTGCCAGAGCACCTGTTCCTGGCCATGTGCAGCACCCCGGAGACGGATCTGCTGG CCATCCTGGACGCCTGGCGCATGGATGCCGCCGCCTTTGCCGGGCTGCTGGAACGCAGTCTGGAGGCCCTGCCCTCGGGC ACAACCGGCCGGCCGGTCATCTCGCACGAACTGGTCTCTCTGTTGCAAAAAGCCTGGCTGGTGGGCAGCCTGGAGTTTCA GGCGGAGAAGATCCGCACCGGCTTCGTGCTTCTGGCCCAGGCCCGGCTGCTGCGCCAGGATCCCGGCCGCACCATGCAGC AGCCCCGCAACGGCTGGATGCGTCCCCTGCGGGCCATAGCCCTGGATTCCCTGCGGCAACGGTTCAAGGACATCGTGGCC GGGAAGTCCCGGGAGGAAGACGCCGCCTCGGCGGCTGACGGCGCTGCCGGCCCTGTGCCCGGCACCGGCGAGAGCCTGCA GAAATACTGTGTGGACCTGACCGAGCGCGCCCGCCGCGGCGAGATCGATCCCGTCTTCGGCCGCGAGGACGCCATGCGCC GCATCGTGGACATCCTGGCCCGCCGCCGCAAGAACAATCCCCTGCTGGTGGGCGATGCCGGCGTGGGCAAGACAGCCGTG GTGGAGGGCCTGGCCCTGCGGCTGGTGGAGGCCGAGGCGCAAGGCTTCGATGCCTCGGGCCTGCCCGTCATGCTCAAGGG CGTGCGCATCCTGGCCCTGGACATGGGGGCCCTGGAAGCCGGCGCAGGCCTCAAAGGCGAGTTCGAAGAACGGCTCAAGG CCGTGGTGGAGGACCTGAAGGCCCTGGAAACACCGGCCATCCTGTTCATCGACGAAGCCCACACCCTCATCGGCGCGGGC GGACGTCCCGGCGCCGATGCCGCCAATTTTCTCAAGCCCACCCTGGCCCGCGGCGAAATCAAGCTCGTGGCCGCCACCAC CTGGAGCGAGCACAAGCGGGTCTTCAGCCGCGATCCGGCCCTCTCCCGTCGCTTCCAGCCCGTGCCGCTGGAGGAACCCA GCCTGGAGACCACCGTGGAGATTCTGCGGGGGCTCAAGTCCAGGTATGAGGCGGATCACCGCGTCACCGTGCGCGACGAT GCCGTGGTGGCTGCGGCCAAGTTCGCCAGCCGCTACATCCCGGATCGCTTTCTGCCGGACAAGGCCGTGGACCTCCTGGA TACCGCCGCGGCCCGCGTCAAGGTCAGCCTCACCTCCAAGCCTGCAGCCCTGGAGCAGGTGGAGCAGCACATCCTGGATC TGCGCCGGCGTATCGAGGCCCTGACCCGGGACAAAAGCCATGGCCTGACCGTGGACGAGGACGCCCTGACCCGCGCCTGG CACGAGCTCAAGGAGCTCAAGACCCAGGCCTGGACCTATTCGGATCGCTGGCGCGCCGAGCAACAGCTGGTGGAGCAGCT CATCGAAATCCGCAGCCGGCTGCAGCAGGAGCGCACGGAGATGGGCATGCCCCGGGAGGCCACCCGGCAGGAAGCCATGC TGCTCCTGGGCCAGCTCAACGAGCTGCAACATGGTGCGCCACTGGTGCGCCACGAGGTGGACCCCGAAATGGTGGCCCAG GTGGTGCACGAGTGGACGGGCATTCCCCTGGCCAGCATCCTGCAGGATCAATACGCCGCCGTGCTGCAGCTGGAGCAGGC CCTGCACTCGCGCGTCAAGGGGCAGGGGCATGCGCTGGAGATCATCATCAAGGAAATCCAGGCCGCGGCCTCGGGCCTCA AGGACGAGTCCTCGCCCATGGCCGTGTTCCTGCTGGCTGGTCCCAGCGGCGTGGGCAAGACGGAGACCGCCCGCGCCCTG GCCGAGCTGCTCTTCGGCGGCGAACAGTCCCTGGTGCTGCTGAACATGGGCGAATACAGCGAAAAGCACAGCGTCAGCCG GCTCATCGGCTCCCCGCCGGGCTATGTGGGCTACGGTGAAGGTGGCGTGCTGACGGAAGCCGTCCGCCGTCGGCCGCATG CCCTGGTGCTTCTGGACGAGGCCGAAAAGGCGCATCCCGAAGTGCTGAATCTCTTCCACCAGGTCTTCGAGCAGGGGATG CTGTCGGATGCCGAGGGCCGTCCTGTGGACTTCCGCAACGTCCTGTTCATCCTCACCACCAATGCCGGTGCCGAAGCCGT GCTCACCGAGCCGGGACTGCGGGAACTCACCACCGTGCAGCGGGCCGAGCGGCTTCAGGCTGCAGTGTGGCCCTCCTTGC GGGAAGCCTATTCCGCCTCGCTGCTGTCTCGCATGACCGTGGCCGTGTTTGCGCCCCTGGAAACCGAGGCCCTGGCCGAA GTGGCCGAGCGCAAGCTGGCCCGGCTGGCCGCCCAGGCCCTGGTGAATGGCGCATTCGTGCTGCAGATTGCCCCGGAAGC GCCCCTGGCCCTGGCCGCCCGCTGCTGGGATCCCGAAAGCGGCGCCCGCAGCCTGGACAGGCTGCTGCACGCCGAGGTGT TGCCCCGGCTGGCGGCGGCGGCGCTCTCCCTCAAGGCGGCAGGCCAGCACCGCGCCGCCCTGACCCTGACCGTGGACGCG CAGGGAGCCGTCTCCATCATGCATCGTGCCCAACCCGTGCCGAATTCGGGACAAGTCTGGGCGGCGCCAGTCTCGCCAGT CTCGCCAGTTCCGCCAGTCTCGCCAGTTCCGCCAGTCTCGGCTGCAGCGGACGAACTGTCCGACTCGGCTGGCGGCGGGG AATCTTACGATGTCGTCTTCTCTGCCGGAAGCGGCCCGGCGGAATAA Protein sequence : MIVDVKLLLERCSAQLTEAMQEAAALASGQAHGEVLPEHLFLAMCSTPETDLLAILDAWRMDAAAFAGLLERSLEALPSG TTGRPVISHELVSLLQKAWLVGSLEFQAEKIRTGFVLLAQARLLRQDPGRTMQQPRNGWMRPLRAIALDSLRQRFKDIVA GKSREEDAASAADGAAGPVPGTGESLQKYCVDLTERARRGEIDPVFGREDAMRRIVDILARRRKNNPLLVGDAGVGKTAV VEGLALRLVEAEAQGFDASGLPVMLKGVRILALDMGALEAGAGLKGEFEERLKAVVEDLKALETPAILFIDEAHTLIGAG GRPGADAANFLKPTLARGEIKLVAATTWSEHKRVFSRDPALSRRFQPVPLEEPSLETTVEILRGLKSRYEADHRVTVRDD AVVAAAKFASRYIPDRFLPDKAVDLLDTAAARVKVSLTSKPAALEQVEQHILDLRRRIEALTRDKSHGLTVDEDALTRAW HELKELKTQAWTYSDRWRAEQQLVEQLIEIRSRLQQERTEMGMPREATRQEAMLLLGQLNELQHGAPLVRHEVDPEMVAQ VVHEWTGIPLASILQDQYAAVLQLEQALHSRVKGQGHALEIIIKEIQAAASGLKDESSPMAVFLLAGPSGVGKTETARAL AELLFGGEQSLVLLNMGEYSEKHSVSRLIGSPPGYVGYGEGGVLTEAVRRRPHALVLLDEAEKAHPEVLNLFHQVFEQGM LSDAEGRPVDFRNVLFILTTNAGAEAVLTEPGLRELTTVQRAERLQAAVWPSLREAYSASLLSRMTVAVFAPLETEALAE VAERKLARLAAQALVNGAFVLQIAPEAPLALAARCWDPESGARSLDRLLHAEVLPRLAAAALSLKAAGQHRAALTLTVDA QGAVSIMHRAQPVPNSGQVWAAPVSPVSPVPPVSPVPPVSAAADELSDSAGGGESYDVVFSAGSGPAE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 4e-104 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpA | YP_008591476.1 | putative type VI secretion ATPase, ClpV1 family | VFG2084 | Protein | 8e-119 | 42 |
| clpA | YP_008591476.1 | putative type VI secretion ATPase, ClpV1 family | VFG2076 | Protein | 9e-115 | 41 |
