Gene Information

Name : DGI_1709 (DGI_1709)
Accession : YP_008590696.1
Strain : Desulfovibrio gigas ATCC 19364
Genome accession: NC_022444
Putative virulence/resistance : Virulence
Product : putative UDP-glucose 4-epimerase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1833844 - 1834881 bp
Length : 1038 bp
Strand : -
Note : -

DNA sequence : 
ATGCAGAGCAGAACCTTACTCAATGAATTCAAATGGATGTTGGATCAGCCGCCCCGGAAATGGCTTGTGACCGGCGTCGC
CGGCTTCATTGGATCCAACCTCCTCGAAACACTCCTTTTCCTTGGGCAGCACGTTGTCGGATTGGACAACTTCTCCACCG
GCAGCGAGCGAAATCTTGCAGACGTGCGGGAGGCTGTGGGGGAGGATCGCTGGAGATCGTTCACGTTTATACAGGGCGAC
ATCTGCAACGTTGCCGACTGCTCTGCCAGCCTTGCCGGCGTGGACGTGGTGCTGCACCAGGCGGCCCTGGGTTCGGTGCC
GCGCTCCATCCAGGACCCCATCACCACCAATCACGCCAATATCACCGGCTTTTTGACGCTGCTGACCACGGCGATGCATC
TTGGCGTCCGCCGATTCGTCTATGCCGCCTCAAGCTCGACATATGGCGATTCACCCACACTGCCAAAAGTGGAGCATGTG
ATCGGCAAGCCCTTGTCGCCCTATGCAGTAACCAAGTATGTGAACGAATTATATGCTGATGTCTTTGCCAAAACCTATGG
CATGGAATGCATCGGGCTGCGCTACTTCAATGTCTTTGGACGCCGCCAGAGTCCGGACGGCGCCTATGCCGCAGTCATCC
CGCTCTGGTTCAGGGGCCTGCTGCAACATGCGGATATTTTCATCAATGGTGACGGGATGACCTCTCGCGATTTCTGCCAT
GTGGACAACGCCGTGCAGGCCAACCTGCGTTCCGCCCTGACCGAGAACCCCGACGCGCTGAATCAGGTGTACAATGTTGC
CTGCGGCAAGCAGGCCTCATTGAATGAATTGTATGCGCTCATCCAATGCAACGTTGCCGACCACACCCCGGACGCAACGG
CCAGGACGCCCACATACAGGGATTTCCGCGCCGGCGATGTCCGGCACTCCCTGGCCGACATCGGCAAGGCCCGCACCCTG
CTCGGGTACGAGCCGTACTATACGCTTGAGGAAGGGCTGCGCATCACCGCGCCGTGGTATATCTCCAGGCTTGCGTAG

Protein sequence : 
MQSRTLLNEFKWMLDQPPRKWLVTGVAGFIGSNLLETLLFLGQHVVGLDNFSTGSERNLADVREAVGEDRWRSFTFIQGD
ICNVADCSASLAGVDVVLHQAALGSVPRSIQDPITTNHANITGFLTLLTTAMHLGVRRFVYAASSSTYGDSPTLPKVEHV
IGKPLSPYAVTKYVNELYADVFAKTYGMECIGLRYFNVFGRRQSPDGAYAAVIPLWFRGLLQHADIFINGDGMTSRDFCH
VDNAVQANLRSALTENPDALNQVYNVACGKQASLNELYALIQCNVADHTPDATARTPTYRDFRAGDVRHSLADIGKARTL
LGYEPYYTLEEGLRITAPWYISRLA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviC NP_807944.1 VI polysaccharide biosynthesis epimerase Virulence SPI-7 Protein 2e-95 61
tviC NP_458739.1 Vi polysaccharide biosynthesis protein, epimerase Virulence SPI-7 Protein 2e-95 61

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DGI_1709 YP_008590696.1 putative UDP-glucose 4-epimerase VFG0430 Protein 7e-96 61