Gene Information

Name : DGI_1401 (DGI_1401)
Accession : YP_008590417.1
Strain : Desulfovibrio gigas ATCC 19364
Genome accession: NC_022444
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1508077 - 1509414 bp
Length : 1338 bp
Strand : +
Note : -

DNA sequence :
GTGCAACAAGGATTACCTCACATGATGTATGCTTTTTCCGCGCTGCAGGATCGCAGCGTTCCCGTGGCGGTGGTGGGGCT
GGGCTATGTGGGCCTGCCCCTGGCTGTGGCCCTGGCCCGGCAGTTCCGGGTGATCGGCTTCGACATCAACGCCACCCGTG
TGCAGGAGCTGCGCCAGGGGCACGACCGCACCGGCGAGGTGGAGGACGCCTGCCTGCAGGCCGTCTCCATCGACTATTCC
CATAATCCCGAAGACCTTGCCGCCGCGGGCGTCATCATTGTGGCCGTGCCCACGCCCATCGATGACCACCGCAGCCCGGA
CCTGCGCCCCGTGCGCGGCGCGAGCATCACCGTGGGCAGGCACATGCGCAAGGGCGCGGTGATCTGCTATGAATCCACGG
TGTATCCCGGGTTGACCGAGGAAGTCTGTGTCCCGCTGCTGGAGGAACACTCCGGCCTGACCTGCGGCGCGGATTTCTGG
GTGGGCTATTCGCCGGAACGCATCAATCCTGGTGACAAAGTCCATACCCTGGAGACCATCGTCAAGGTGGTGGCCGGACA
GGACGACGCCACGGCGGATCTGCTCTGTCAGCTGTATGGCGCGGTCATCACCGCCGGGGTGCATCGGGCGTCGTCCATCA
AGGTGGCCGAGGCGGCCAAGGTGATCGAAAACACCCAGCGCGACCTGAACATCGCCCTGATGAACGAATTGTCCATCCTG
TTCGATCGCATGGGCATTGATACGCTGGAGGTGCTGCAGGCCGCAGCCACCAAATGGAACTTCATCCGCTTCACCCCCGG
TCTGGTGGGGGGGCACTGCATCGGCGTGGACCCGTACTACCTGACCTTCAAGGCCGAATCCCTGGGGTTCCATCCGCAGG
TGATCCTGGCCGGGCGGCGCATCAACGATTTCATGGGCAAATACGTGGCGGAAACGTGCATCAAGAAGCTCTTTCAGGGC
GGCGGCCGCACCCAGGGGGCGCGGGTGGGCGTGCTGGGCTTCACGTTCAAGGAAAACGTGCCGGATCTGCGCAACACCCG
GGTCATTGATGTGGTGCGGGAGCTGGAGGAATACGCCGTCACCGTGCTGGTGCACGATCCGGTATGCGATGCCGAGGAGG
CCCACGAGGAATACGGGCTGACGCTCTGCGGCCTGGAGGACTTCCAGGATCTGGACGCCGTGATCGTGGCCGTGCCGCAT
CAGGTATTCGCCTCGTTGACGCCGGAGACGGTGCGCGGCATGCTTTCGGATCCGCACAAGGCGTTGCTGCTGGACTTGCG
GGCCCTGTTCGAGCCCACTGTCTGGCGGCAGGCAGGCTTCAGCTACTGGCGGCTGTAG

Protein sequence :
MQQGLPHMMYAFSALQDRSVPVAVVGLGYVGLPLAVALARQFRVIGFDINATRVQELRQGHDRTGEVEDACLQAVSIDYS
HNPEDLAAAGVIIVAVPTPIDDHRSPDLRPVRGASITVGRHMRKGAVICYESTVYPGLTEEVCVPLLEEHSGLTCGADFW
VGYSPERINPGDKVHTLETIVKVVAGQDDATADLLCQLYGAVITAGVHRASSIKVAEAAKVIENTQRDLNIALMNELSIL
FDRMGIDTLEVLQAAATKWNFIRFTPGLVGGHCIGVDPYYLTFKAESLGFHPQVILAGRRINDFMGKYVAETCIKKLFQG
GGRTQGARVGVLGFTFKENVPDLRNTRVIDVVRELEEYAVTVLVHDPVCDAEEAHEEYGLTLCGLEDFQDLDAVIVAVPH
QVFASLTPETVRGMLSDPHKALLLDLRALFEPTVWRQAGFSYWRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 3e-110 61
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 8e-94 52
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 8e-94 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DGI_1401 YP_008590417.1 hypothetical protein VFG0431 Protein 3e-94 52