Gene Information

Name : DGI_1224 (DGI_1224)
Accession : YP_008590250.1
Strain : Desulfovibrio gigas ATCC 19364
Genome accession: NC_022444
Putative virulence/resistance : Virulence
Product : putative ATPase component of Mn/Zn ABC-type transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1308814 - 1309773 bp
Length : 960 bp
Strand : -
Note : -

DNA sequence : 
TTGATCTGCCGCCCCTGCCCCGCGAGCGCATTGAGCTGCTGGCCCGGGCCACCTTCCCCGAGGGCGAAGGCCACCGCCGC
CATGCCCTGCGGGTACGGGTGCTGTTCCACGGCGCGCCCCTGGCCGAGGCCACGGCCTGGAGCCAGGCCGGCCTGCCCCT
TACCCTCGTGCTGCCCGTGGATCTGCGTCATGTCCAATAATTCCATGCCCTATGCCATCGAGGTGGAGCACCTTACCGTG
AGCTATGGCCCTTCACCGGCCCTGCTGGACGTCACGGTGCGCATTGAGCCCGGGCTGCTGGTGGGGGTCATCGGCCCCAA
TGGCGGCGGCAAATCCACCTTCATCAAGGCCGTGCTGGGCTTCGTTAAGCCGGACCTGGGCCGCGTGCGCATCCTGGGCC
AGCCCGTGGAAAAGACCAAGGGGCTGGTGGCCTACGTGCCCCAGCGCGGGGCCGTGGACTGGGATTTCCCCATCACCGTG
GGCCAGGTGGCCATGATGGGCCGCTACGGCCGCATCCCCTGGTGGAAGGATCCCGGCCGCCAGGACCGCGAACGCGTGGA
AGAAGCCCTGGCCATGGTGCGCATGGAAGGCTTCCGCCACCGGCAGATCGGCCAGCTTTCCGGCGGGCAGCAGCAGCGGG
TGTTCATGGCCCGGGCCCTGGCCCAGGGCGCGGAGGTGCTGCTGCTGGACGAGCCCTTTGCCGGGGTGGACGCAGCCACT
GAACGCGCCATCCTGGACGTGTTCTCCCGGGCCCGCGCCGCCGGCAAGACACTGGTGGTGGTGCATCACGATCTGGCCAC
CGCCGCCGAGTATTTCGACCGTCTCCTGCTCATCAAGCAGCGCAGCTACGGCTACGGCCCGCCCCAGGCCGTGTTGCAGG
AAGAATTGCTGGCCGAGGTGTACGAAGGCAAGCTGCGGCTCTTCGGCCTTCCGACCAAGGAAACTGGAACCGCGAGATGA

Protein sequence : 
MICRPCPASALSCWPGPPSPRAKATAAMPCGYGCCSTARPWPRPRPGARPACPLPSCCPWICVMSNNSMPYAIEVEHLTV
SYGPSPALLDVTVRIEPGLLVGVIGPNGGGKSTFIKAVLGFVKPDLGRVRILGQPVEKTKGLVAYVPQRGAVDWDFPITV
GQVAMMGRYGRIPWWKDPGRQDRERVEEALAMVRMEGFRHRQIGQLSGGQQQRVFMARALAQGAEVLLLDEPFAGVDAAT
ERAILDVFSRARAAGKTLVVVHHDLATAAEYFDRLLLIKQRSYGYGPPQAVLQEELLAEVYEGKLRLFGLPTKETGTAR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 7e-50 45
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 6e-50 45
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 3e-48 44
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 3e-48 44
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-49 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DGI_1224 YP_008590250.1 putative ATPase component of Mn/Zn ABC-type transporter BAC0400 Protein 4e-55 50
DGI_1224 YP_008590250.1 putative ATPase component of Mn/Zn ABC-type transporter BAC0350 Protein 3e-50 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DGI_1224 YP_008590250.1 putative ATPase component of Mn/Zn ABC-type transporter VFG0526 Protein 3e-50 45