Gene Information

Name : DGI_1064 (DGI_1064)
Accession : YP_008590109.1
Strain : Desulfovibrio gigas ATCC 19364
Genome accession: NC_022444
Putative virulence/resistance : Virulence
Product : putative transcriptional regulatory protein ZraR
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1133241 - 1134629 bp
Length : 1389 bp
Strand : +
Note : -

DNA sequence : 
ATGAGCATGTCACGCATTCTGGTGGTGGATGACGATCCCGGCCACCTCGAATCCCTGAGCCTGCTGCTCAAGGGCTGGGG
CTATGCCGTCACGCCGGCCACGCGGGGGGAGGAGGCCGTCTCTCTGGTGGAGCAAGGCCCCTTTGACGCCGTGCTCATGG
ATGTGCGCATGCCCGGCATGTCTGGCGTGGAGGCCCTGACGCGCATCAAGCAGCGCAACCCGGCCGTGCCGGTGCTCATC
ATGACGGCGTATTCCTCCGTGGATGCCGCGGTGGAGGCCCTCAAGGCCGGCGCCTATGACTACCTGACCAAGCCGCTGGA
TTTCGAGCTGGTGCGCCTGGCCCTGGATCGAGCCCTGGACCACACCCGCCTGAAGGAGGAAAACGCCAGCCTGCGCGCCT
TGTTGCCGGATGCCTTCGATCCCGGTCAGCTCATCGGCGTCAGTCCGGCGTTGCAGGAAGCCCTGACCATGGCCGCCGTG
GCCGCCCGCAGCGAGGCCGCCACCCTGGTGACTGGCGAATCCGGCACAGGCAAGGAGCTTATCGCCCGGGCCGTGCATGC
CAATTCCGCCCGCGCCCGGCGGCCGCTGGCCACCCTCAACTGCGCGGCCCTCACCACGTCGCTGCTGGAATCCGAACTCT
TCGGCCATGAGAAGGGCGCCTTCACCGGGGCAGACAAGCGCCGGGAAGGCCGCATCCTCCAGGCCGACGGCGGCACGCTG
TTTCTGGATGAAATCGGCGAGCTGGACGCACTCATCCAGGCGAAATTACTGCGCGTCCTCCAGCAGGGAGAACTGCAGCG
CCTGGGCAGCGACGACGTGATTACCGCGGATGTGCGCATCATCGCCGCCACGAATCGGAATCTGGAGGCCGAAGTGGCCG
CCGGGCGGTTCCGCCAGGATTTATTCTATCGTCTCAATGTGTTGCACATCCACGTCCCGCCCCTGCGCGAACGACAGGAG
GACATCCCGCTGTTGTCGCAGCACTTTCTTGGAAAGTTTTCCGCCAAGTACGGCAAGGCGCTGAAGCGCTTCACCCCCCA
GGCCATGGACGCCCTGGTGCGCCATCCCTGGCCCGGCAATGTGCGGGAGCTGGAAAATGCCATCGAACGCGCGGTGTTGC
TGGCGGCCGGGGACTACGTGAGCGACCGCGAGCTGCCCCTGGCCCTGCGCCAGATGGCAACGAAGGCGAGCGCGAGCGTG
GGGGGCAGCGAGCCGCCCACGCCCGCCACGGCGCCGTCCCTGGCCGGCCGCCCCCTGGAAGACGTGGAAAAGGCCGCCAT
CCTGCAGACCCTGGCCCAGACCGGCGGCAACAAAAGCGAGGCTGCCCGGCTGCTGGGCATCTCCCGCGTCACCCTGCACA
AGAAACTGCAGGGGTATGGGGTGGATTGA

Protein sequence : 
MSMSRILVVDDDPGHLESLSLLLKGWGYAVTPATRGEEAVSLVEQGPFDAVLMDVRMPGMSGVEALTRIKQRNPAVPVLI
MTAYSSVDAAVEALKAGAYDYLTKPLDFELVRLALDRALDHTRLKEENASLRALLPDAFDPGQLIGVSPALQEALTMAAV
AARSEAATLVTGESGTGKELIARAVHANSARARRPLATLNCAALTTSLLESELFGHEKGAFTGADKRREGRILQADGGTL
FLDEIGELDALIQAKLLRVLQQGELQRLGSDDVITADVRIIAATNRNLEAEVAAGRFRQDLFYRLNVLHIHVPPLRERQE
DIPLLSQHFLGKFSAKYGKALKRFTPQAMDALVRHPWPGNVRELENAIERAVLLAAGDYVSDRELPLALRQMATKASASV
GGSEPPTPATAPSLAGRPLEDVEKAAILQTLAQTGGNKSEAARLLGISRVTLHKKLQGYGVD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
norR ABD94719.1 putative nitric oxide reductase transcriptional regulator Not tested ExoU island B Protein 7e-53 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DGI_1064 YP_008590109.1 putative transcriptional regulatory protein ZraR BAC0467 Protein 4e-123 58
DGI_1064 YP_008590109.1 putative transcriptional regulatory protein ZraR BAC0089 Protein 2e-85 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
DGI_1064 YP_008590109.1 putative transcriptional regulatory protein ZraR VFG0116 Protein 3e-75 43
DGI_1064 YP_008590109.1 putative transcriptional regulatory protein ZraR VFG1249 Protein 4e-71 42
DGI_1064 YP_008590109.1 putative transcriptional regulatory protein ZraR VFG1214 Protein 3e-74 41