Gene Information

Name : SA40_0900 (SA40_0900)
Accession : YP_008587544.1
Strain : Staphylococcus aureus SA40
Genome accession: NC_022443
Putative virulence/resistance : Unknown
Product : putative transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 994914 - 996515 bp
Length : 1602 bp
Strand : +
Note : -

DNA sequence :
ATGTATAAAAATTATAACATGACCCAACTTACACTACCAATAGAAACTTCTGTTAGAATTCCTCAAAATGATATTTCGCG
ATATGTTAATGAAATTGTTGAAACGATACCTGATAGCGAATTCGATGAATTCAGACATCATCGTGGCGCAACATCCTATC
ATCCAAAAATGATGTTAAAAATCATCTTATATGCATATACTCAATCTGTATTTTCTGGTCGTAGAATAGAGAAATTACTT
CATGACAGTATTCGAATGATGTGGTTAGCTCAAGATCAAACACCTTCTTATAAAACTATTAATCGTTTTAGAGTGAATCC
TAATACTGATGCGTTAATTGAATCTTTATTTATTCAGTTCCATAGTCAATGTTTAAAGCAAAATCTTGTTGATGATAATT
CAATTTTTATTGATGGTACAAAAGTAGAAGCTAGTGCCAATAGATATACATTTGTGTGGAAGAAAAGTATTCAAAATCAC
GAATCGAAATTGAACGAAAATTCAAAAGCATTATATCGTGACTTAGTTGAAGAAAAAATAATACCAGAGATAAAAGAAGA
TGGAGATAGCGATTTAACAATAGAAGAAATAGATTTAATTGGTAGTCATTTAGATAAAGAAATCGAAGATTTAAATCATT
CTATTGAGAACGAAGATTGTACTCAAATTAGAAAACAGACCCGTAAAAAAAGAACTGAGATTAAGAAGTTCAAAAAGAAA
TTTGATGATTATTCCGAAAGAAAAAGTAAATATGAAGAACAAAAATCGATTCTTAAAGATAGAAATAGCTTTTCTAAAAC
TGATCATGATGCAACTTTTATGAGAATGAAGGAAGACCATATGAAAAATGGCCAACTTAAGCCAGGATACAATTTACAAA
TAGCGACAAATTCTCAATTTGTTTTATCCTATGACCTATTTCAAAACCCGACAGATACTAGAACTTTAATTCCATTTTTA
ACAATGATTCAAAATACCTTCGGTTATTTACCGGAGTATATTGTAGCTGATGCAGGTTATGGTAGTGAGCAAAACTATAT
GGCTATTATAGATGATTTTAATAAAACGCCACTTATTACGTATGGCATGTTTATTAAAGATAAAACTAGAAAGTTTAAAA
GTGACATTTTTAACACTCAAAATTGGAAATATGACGAACTTAATGATGAATTTATATGTCCTAATAACAAAAGAATAGGT
TTTAAAAGATATACATACCGTAATGATAGATATGGTTTTAAACGTGACTTCAAGCTATATGAATGCGATGACTGTTCAGC
ATGTTCTTTGAGGCAACAATGCATGAAGCCAAATTCGAAATCCAATAAGAAAATCATGAAGAATTATAATTGGGAATACT
TTAAAGCCCAAATTAATCAAAAGCTTTCTGAACCAGAAACGAAAAAAATCTATAGTCAAAGAAAAATTGATGTAGAGCCT
GTTTTTGGATTTATGAAGGCTATTTTGGGTTTCACTCGAATGTCAGTTCGAGGAATAAATAAAGTTAAACGAGAGCTAGG
TTTTGTATTAATGGCACTTAATATAAGGAAAATAGCAGCTCGACGAGCTGTATATTATCAAATACATTTAAAAAAAAGCT
GA

Protein sequence :
MYKNYNMTQLTLPIETSVRIPQNDISRYVNEIVETIPDSEFDEFRHHRGATSYHPKMMLKIILYAYTQSVFSGRRIEKLL
HDSIRMMWLAQDQTPSYKTINRFRVNPNTDALIESLFIQFHSQCLKQNLVDDNSIFIDGTKVEASANRYTFVWKKSIQNH
ESKLNENSKALYRDLVEEKIIPEIKEDGDSDLTIEEIDLIGSHLDKEIEDLNHSIENEDCTQIRKQTRKKRTEIKKFKKK
FDDYSERKSKYEEQKSILKDRNSFSKTDHDATFMRMKEDHMKNGQLKPGYNLQIATNSQFVLSYDLFQNPTDTRTLIPFL
TMIQNTFGYLPEYIVADAGYGSEQNYMAIIDDFNKTPLITYGMFIKDKTRKFKSDIFNTQNWKYDELNDEFICPNNKRIG
FKRYTYRNDRYGFKRDFKLYECDDCSACSLRQQCMKPNSKSNKKIMKNYNWEYFKAQINQKLSEPETKKIYSQRKIDVEP
VFGFMKAILGFTRMSVRGINKVKRELGFVLMALNIRKIAARRAVYYQIHLKKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SE0076 NP_763631.1 transposase Not tested SCCpbp4 Protein 0.0 83
unnamed BAA86649.1 hypothetical protein Not tested Type-I SCCmec Protein 0.0 83
SACOL0036 YP_184947.1 IS1272 transposase Not tested Type-I SCCmec Protein 0.0 83
SAMSHR1132_00350 YP_005324559.1 putative transposase Not tested Type-IIIinv SCCmec Protein 0.0 83
MW0034 NP_644849.1 hypothetical protein Not tested Type-IV SCCmec Protein 0.0 83
SAUSA300_0034 YP_492755.1 IS1272, transposase Not tested Type-IV SCCmec Protein 0.0 83
tnp YP_254534.1 IS1272 transposase Not tested ¥ðSh2 Protein 3e-172 82
unnamed BAC67565.1 hypothetical protein Not tested Type-IVc SCCmec Protein 2e-148 81