Gene Information

Name : SA40_0036 (SA40_0036)
Accession : YP_008586683.1
Strain : Staphylococcus aureus SA40
Genome accession: NC_022443
Putative virulence/resistance : Unknown
Product : putative transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 43712 - 45232 bp
Length : 1521 bp
Strand : -
Note : -

DNA sequence :
ATGTTAAAAGTGATTCTATATGCCTACACACAATCTGTATTCTCAGGTCGTAAAATAGAAAAAATGCTTAATGATAGCAT
CCGAATGATGTGGCTATCACAAAATCAAAAACCTTCTTATAAAACAATTAATCAATTTAGAGTAAATCCAAAAGTAGATG
CTTTATTAGAATCTTTATTTATTCAATTTTACAGTCAGTGTGTAAAACAAAATCTTATAGATGATAAAGCTATTTTTATT
GATGGTACAAAAATTGAAGCAAATGCCAATCGATATACATTTGTATGGAAAAAGAGTATTCAAAACCATGAATCAAAGAT
GAATGAGGATTCTAAAGCCCTCTACCATGAATTGGTAACCAATAAAATCATACCGGAAATTAAAGAAGATCATGATAATG
AATTAACAAAAGAAGAAATAGATTTGATTGGTAGTCACTTAGATAAAGAAATCGAAGATTTAAACCAACATATCAACAAT
GAAAAATGTACTAAAACAAGAAAACAAATACGTCTCAAAAGAACTAAAATCAAAAAATACAAAAAGCAAATCAATGATTA
TTTTGAGCGAAAGTATCGATACGAATTTCAAAAATCTATTTTAAAGGATAGAAATAGTTATTCTAAGACAGATTATGATG
CGACATTTATGAGAATGAAAGAAGATCACATGAAAAATGGACAACTTAAGCCAGGGTATAATTTACAAATAGCAACAAAT
TCCCAATTTGTTTTATCTTATAATGTGTATCAAAATCCAACGGATACTAGAACGATGATTCCATTTTTAAATTCAATTCA
AGAGACCTACGGTCATTTACCTGAATATATTGTAGCTGATGCAGGTTATGGTAGTGAATCAAATTATAAGGCAATTATAG
ATGACTTTAATCGAACGCCACTCATAACATATGGAATGTTTATAAAAGATAAAACTAAAAAATATAAAAGTGACATCTTT
AATACTCAAAATTGGAACTATGACGAAATTAATGACGAATTCATTTGTCCGAATAATAAACGGCTAGGTTTTAAAAGATA
TGCCTATCGTCATGATAAGTATGGTTATAAGCGAGACTTCAAATTATATGAATGTGATGATTGTTCAGAATGTCCTCTGA
AAAATCAATGTATGAACTTCAATTCAAAAACAAACAAAAAAATAATGAAGAATTATAACTGGGAATATTTTAAATCCCAA
ATTAACAAAAAGCTTTCAGAACCAGAAACAAAAAATATCTACAGTCAAAGAAAAATTGATGTGGAACCTGTTTTTGGATT
TATGAAGGCTATTTTGGGTTTCACTCGGATGTCTGTCCGAGGACTCAATAAAGTCAAAAGAGAACTTGGTTTTGTATTAA
TGGCACTTAATATAAGAAAAGTAGTAGCTCAACGAGCTGAAAATAATCAAAAAATTTATAAAAAAGACAATTTCTATATT
ATTTCAATAGAAATTGTCTTTTTTCACTTATCCAAGAACTTTATGTCCCGGACTCATTATGATTTATTTTTTTATTGCTG
A

Protein sequence :
MLKVILYAYTQSVFSGRKIEKMLNDSIRMMWLSQNQKPSYKTINQFRVNPKVDALLESLFIQFYSQCVKQNLIDDKAIFI
DGTKIEANANRYTFVWKKSIQNHESKMNEDSKALYHELVTNKIIPEIKEDHDNELTKEEIDLIGSHLDKEIEDLNQHINN
EKCTKTRKQIRLKRTKIKKYKKQINDYFERKYRYEFQKSILKDRNSYSKTDYDATFMRMKEDHMKNGQLKPGYNLQIATN
SQFVLSYNVYQNPTDTRTMIPFLNSIQETYGHLPEYIVADAGYGSESNYKAIIDDFNRTPLITYGMFIKDKTKKYKSDIF
NTQNWNYDEINDEFICPNNKRLGFKRYAYRHDKYGYKRDFKLYECDDCSECPLKNQCMNFNSKTNKKIMKNYNWEYFKSQ
INKKLSEPETKNIYSQRKIDVEPVFGFMKAILGFTRMSVRGLNKVKRELGFVLMALNIRKVVAQRAENNQKIYKKDNFYI
ISIEIVFFHLSKNFMSRTHYDLFFYC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SACOL0036 YP_184947.1 IS1272 transposase Not tested Type-I SCCmec Protein 0.0 100
SAMSHR1132_00350 YP_005324559.1 putative transposase Not tested Type-IIIinv SCCmec Protein 0.0 100
MW0034 NP_644849.1 hypothetical protein Not tested Type-IV SCCmec Protein 0.0 100
unnamed BAA86649.1 hypothetical protein Not tested Type-I SCCmec Protein 0.0 100
unnamed BAC67565.1 hypothetical protein Not tested Type-IVc SCCmec Protein 5e-173 100
SAUSA300_0034 YP_492755.1 IS1272, transposase Not tested Type-IV SCCmec Protein 0.0 99
tnp YP_254534.1 IS1272 transposase Not tested ¥ðSh2 Protein 1e-171 99
SE0076 NP_763631.1 transposase Not tested SCCpbp4 Protein 0.0 90