Gene Information

Name : SA40_2420 (SA40_2420)
Accession : YP_008589057.1
Strain : Staphylococcus aureus SA40
Genome accession: NC_022443
Putative virulence/resistance : Virulence
Product : putative capsule synthesis protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2677719 - 2678486 bp
Length : 768 bp
Strand : -
Note : -

DNA sequence : 
ATGATTGATATTCATAACCATATATTAGTTGATATAGATGATGGTCCTAAAACAATTGAAAAGAGTATTGCACTATTAAA
GCAAGCTAAGGATGAAGGTGTAACAAGTATTGTAGCGACACCTCATCATTTGCATCCGAGATATGATAATACATTTCAAC
AAGTGCTTGTGAAATTGGCGGAGTTAAGAACGAATCCAGAAGTTCAAGCATTGGATATTAAATTATTTCCCGGGCAAGAA
ATTAGAATTACAGATTCGATTCTACAAGGCTTAGATAATGGTAGTATTCAAGGTATTAATCGTTCGAAATATTTACTAAT
TGAATTTCCAACGGGCGAAGTACCACATTATACAAAACAATTGTTTTTTGAAATACAATCGAGAGGCTACATACCAATCA
TTGCACATCCTGAAAGAAATAGAAGTATCGCCAAAAATCCAGAAATATTATATGAACTTGTTGCAAATGGTGCATTGAGT
CAATTAACATCGAGTTCTTTAGTTGGTGGATTTGGAAAAAGCATTCAAAAGTTATCATTACAATTTATAGAATGTAATTT
GGCTCATTTTGTAGCTTCAGATGCACATTCATGTGACCAAAGACCATTTTTGATGCAAGAATTATTTCACAATCATAAAT
TGAAGAAATATTCGAATGACATTGAAGCATTACTTCGAAATGCCAGTTCAGTAATCAATGATAATTTTGTTTATTTAGAC
AGACCGACTAAGCCAGGAAAAGTGAAGTCGTTTTTGAAATGGTTTTAA

Protein sequence : 
MIDIHNHILVDIDDGPKTIEKSIALLKQAKDEGVTSIVATPHHLHPRYDNTFQQVLVKLAELRTNPEVQALDIKLFPGQE
IRITDSILQGLDNGSIQGINRSKYLLIEFPTGEVPHYTKQLFFEIQSRGYIPIIAHPERNRSIAKNPEILYELVANGALS
QLTSSSLVGGFGKSIQKLSLQFIECNLAHFVASDAHSCDQRPFLMQELFHNHKLKKYSNDIEALLRNASSVINDNFVYLD
RPTKPGKVKSFLKWF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1C AAA64642.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 2e-73 57
SSP0062 YP_300152.1 capsular polysaccharide biosynthesis protein Not tested SCC15305cap Protein 7e-69 57

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SA40_2420 YP_008589057.1 putative capsule synthesis protein VFG1299 Protein 1e-64 53