Gene Information

Name : SA40_2100 (SA40_2100)
Accession : YP_008588741.1
Strain : Staphylococcus aureus SA40
Genome accession: NC_022443
Putative virulence/resistance : Unknown
Product : putative transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2309293 - 2310894 bp
Length : 1602 bp
Strand : +
Note : -

DNA sequence :
ATGTATAAAAATTATAACATGACCCAACTTACACTACCAATAGAAACTTCTGTTAGAATTCCTCAAAATGATATTTCGCG
ATATGTTAATGAAATTGTTGAAACGATACCTGATAGCGAATTCGATGAATTCAGACATCATCGTGGCGCAACATCCTATC
ATCCAAAAATGATGTTAAAAATCATCTTATATGCATATACTCAATCTGTATTTTCTGGTCGTAGAATAGAGAAATTACTT
CATGACAGTATTCGAATGATGTGGTTAGCTCAAGATCAAACACCTTCTTATAAAACTATTAATCGTTTTAGAGTGAATCC
TAATACTGATGCGTTAATTGAATCTTTATTTATTCAGTTCCATAGTCAATGTTTAAAGCAAAATCTTATTGATGATAATT
CAATTTTTATTGATGGTACAAAAGTAGAAGCTAGTGCCAATAGATATACATTTGTGTGGAAGAAAAGTATTCAAAATCAC
GAATCGAAATTGAACGAAAATTCAAAAGCATTATATCGTGACTTAGTTGAAGAAAAAATAATACCAGAGATAAAAGAAGA
TGGAGATAGCGATTTAACAATAGAAGAAATAGATTTAATTGGTAGTCATTTAGATAAAGAAATCGAAGATTTAAATCATT
CTATTGAGAACGAAGATTGTACTCAAATTAGAAAACAGACCCGTAAAAAAAGAACTGAGATTAAGAAGTTCAAAAAGAAA
TTTGATGATTATTCCGAAAGAAAAAGTAAATATGAAGAACAAAAATCGATTCTTAAAGATAGAAATAGCTTTTCTAAAAC
TGATCATGATGCAACTTTTATGAGAATGAAGGAAGACCATATGAAAAATGGTCAACTTAAGCCAGGATACAATTTACAAA
TAGCGACAAATTCTCAATTTGTTTTATCCTATGACCTATTTCAAAACCCGACAGATACTAGAACTTTAATTCCATTTTTA
ACAATGATTCAAAATACCTTCGGTTATTTACCGGAGTATATTGTAGCTGATGCAGGTTATGGTAGTGAGCAAAACTATAT
GGCTATTATAGATGATTTTAATAAAACGCCACTTATTACGTATGGCATGTTTATTAAAGATAAAACTAGAAAGTTTAAAA
GTGACATTTTTAACACTCAAAATTGGAAATATGACGAACTTAATGATGAATTTATATGTCCTAATAACAAAAGAATAGGT
TTTAAAAGATATGCATACCGTAATGATAGATATGGTTTTAAACGTGACTTCAAGCTATATGAATGCGATGACTGTTCAGC
ATGTTCTTTGAGGCAACAATGCATGAAGCCAAATTCGAAATCCAATAAGAAAATCATGAAGAATTATAATTGGGAATACT
TTAAAGCCCAAATTAATCAAAAGCTTTCTGAACCAGAAACGAAAAAAATCTATAGTCAAAGAAAAATTGATGTAGAGCCT
GTTTTTGGATTTATGAAGGCTATTTTGGGTTTCACTCGAATGTCAGTTCGAGGAATAAATAAAGTTAAACGAGAGCTAGG
TTTTGTATTAATGGCACTTAATATAAGGAAAATAGTAGCTCGACGAGCTGTATATTATCAAATACATTTAAAAAAAAGCT
GA

Protein sequence :
MYKNYNMTQLTLPIETSVRIPQNDISRYVNEIVETIPDSEFDEFRHHRGATSYHPKMMLKIILYAYTQSVFSGRRIEKLL
HDSIRMMWLAQDQTPSYKTINRFRVNPNTDALIESLFIQFHSQCLKQNLIDDNSIFIDGTKVEASANRYTFVWKKSIQNH
ESKLNENSKALYRDLVEEKIIPEIKEDGDSDLTIEEIDLIGSHLDKEIEDLNHSIENEDCTQIRKQTRKKRTEIKKFKKK
FDDYSERKSKYEEQKSILKDRNSFSKTDHDATFMRMKEDHMKNGQLKPGYNLQIATNSQFVLSYDLFQNPTDTRTLIPFL
TMIQNTFGYLPEYIVADAGYGSEQNYMAIIDDFNKTPLITYGMFIKDKTRKFKSDIFNTQNWKYDELNDEFICPNNKRIG
FKRYAYRNDRYGFKRDFKLYECDDCSACSLRQQCMKPNSKSNKKIMKNYNWEYFKAQINQKLSEPETKKIYSQRKIDVEP
VFGFMKAILGFTRMSVRGINKVKRELGFVLMALNIRKIVARRAVYYQIHLKKS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed BAA86649.1 hypothetical protein Not tested Type-I SCCmec Protein 0.0 84
SACOL0036 YP_184947.1 IS1272 transposase Not tested Type-I SCCmec Protein 0.0 84
SAMSHR1132_00350 YP_005324559.1 putative transposase Not tested Type-IIIinv SCCmec Protein 0.0 84
MW0034 NP_644849.1 hypothetical protein Not tested Type-IV SCCmec Protein 0.0 84
SE0076 NP_763631.1 transposase Not tested SCCpbp4 Protein 0.0 83
SAUSA300_0034 YP_492755.1 IS1272, transposase Not tested Type-IV SCCmec Protein 0.0 83
tnp YP_254534.1 IS1272 transposase Not tested ¥ðSh2 Protein 2e-172 82
unnamed BAC67565.1 hypothetical protein Not tested Type-IVc SCCmec Protein 2e-148 82