Gene Information

Name : xerD (SA40_1369)
Accession : YP_008588012.1
Strain : Staphylococcus aureus SA40
Genome accession: NC_022443
Putative virulence/resistance : Unknown
Product : integrase/recombinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1523615 - 1524502 bp
Length : 888 bp
Strand : -
Note : -

DNA sequence :
ATGGAAACAATTATTGAAGAATATTTGCGTTTTATACAAATTGAAAAAGGTCTAAGTTCTAACACAATTGGTGCTTATAG
ACGTGATTTGAAAAAGTATCAAGATTATATGACTGAACATCATATCTCGCATATTGATTTTATAGATCGACAATTAATTC
AAGAGTGTTTGGGGCATTTAATAGACCAAGGGCAATCTGCTAAATCTATTGCGCGATTTATTTCAACAATCCGTAGTTTT
CATCAATTTGCTATAAGAGAAAAATATGCGGCGAAAGATCCAACGGTATTATTAGATTCACCAAAATATGACAAAAAATT
GCCTGACGTTTTAAATGTTGACGAAGTGTTGGCTTTATTAGAAACGCCGGATTTAAATAAAATTAATGGTTATCGTGATC
GTACGATGTTAGAACTTCTGTACGCAACGGGAATGCGTGTATCTGAATTGATACATTTAGAGTTAGAGAACGTGAACTTA
ATAATGGGGTTTGTACGCGTATTTGGTAAAGGCGATAAAGAAAGAATTGTACCATTAGGCGACGCAGTCATTGAGTACTT
AACCACTTATATTGAAACGATTAGACCGCAACTTTTAAAAAAGACTGTTACTGAAGTCTTATTTTTAAATATGCATGGTA
AACCTTTATCACGACAAGCAATATGGAAAATGATTAAACAAAATGGTGTAAAGGCAAACATTAAAAAGACGCTAACGCCA
CATACGTTACGCCACTCTTTTGCGACACATTTATTGGAAAATGGCGCAGATTTAAGAGCAGTGCAAGAGATGTTAGGTCA
CTCTGACATCTCTACTACCCAACTCTATACACATGTTTCAAAATCTCAAATTAGAAAAATGTATAACCAATTTCATCCTA
GAGCATAA

Protein sequence :
METIIEEYLRFIQIEKGLSSNTIGAYRRDLKKYQDYMTEHHISHIDFIDRQLIQECLGHLIDQGQSAKSIARFISTIRSF
HQFAIREKYAAKDPTVLLDSPKYDKKLPDVLNVDEVLALLETPDLNKINGYRDRTMLELLYATGMRVSELIHLELENVNL
IMGFVRVFGKGDKERIVPLGDAVIEYLTTYIETIRPQLLKKTVTEVLFLNMHGKPLSRQAIWKMIKQNGVKANIKKTLTP
HTLRHSFATHLLENGADLRAVQEMLGHSDISTTQLYTHVSKSQIRKMYNQFHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 4e-52 43
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 4e-52 43