Gene Information

Name : capM (SA40_0128)
Accession : YP_008586775.1
Strain : Staphylococcus aureus SA40
Genome accession: NC_022443
Putative virulence/resistance : Virulence
Product : capsular polysaccharide synthesis enzyme
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 151780 - 152337 bp
Length : 558 bp
Strand : +
Note : -

DNA sequence : 
ATGAAGCGATTATTCGATGTAGTGAGTTCAATATATGGTTTAGTAGTTTTAAGTCCGATTCTGTTAATTACAGCATTACT
AATTAAAATGGAATCATCTGGACCAGCCATTTTCAAACAAAAAAGACCGACGATTAATAATGAATTGTTTAATATTTATA
AGTTTAGATCAATGAAAATAGACACACCTAATGTTGCAACTGATTTAATGGATTCAACATCGTATATAACAAAGACAGGG
AAGGTCATTCGTAAGACCTCTATTGATGAATTGCCACAATTATTGAATGTTTTAAAAGGAGAAATGTCAATTGTAGGTCC
TAGACCAGCTCTTTATAATCAATACGAATTAATTGAAAAACGTACAAAAGCGAACGTGCATACAATTAGACCAGGTGTAA
CAGGGCTAGCTCAAGTGATGGGGAGAGATGATATTACTGATGATCAAAAAGTAGCGTATGATCATTATTACTTAACACAT
CAATCTATGATGCTTGATATGTATATCATATATAAAACAATTAAAAATATCGTTACTTCAGAAGGTGTGCATCACTAA

Protein sequence : 
MKRLFDVVSSIYGLVVLSPILLITALLIKMESSGPAIFKQKRPTINNELFNIYKFRSMKIDTPNVATDLMDSTSYITKTG
KVIRKTSIDELPQLLNVLKGEMSIVGPRPALYNQYELIEKRTKANVHTIRPGVTGLAQVMGRDDITDDQKVAYDHYYLTH
QSMMLDMYIIYKTIKNIVTSEGVHH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 2e-63 69
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 5e-63 68

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
capM YP_008586775.1 capsular polysaccharide synthesis enzyme VFG1309 Protein 6e-85 99
capM YP_008586775.1 capsular polysaccharide synthesis enzyme VFG1369 Protein 2e-32 49